RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PVRIGQ6DKI7 326 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 NPPCP23582 126 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 S100A2P29034 98 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 MFAP2P55001 183 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 SLC25A39Q9BZJ4 359 aaPredicted RBP7.37□□□□□ -1.23
SSR3-201ENST00000265044 NPFFR1Q9GZQ6 430 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 BIN3Q9NQY0 253 aa7.37□□□□□ -1.23
SSR3-201ENST00000265044 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
SSR3-201ENST00000265044 FN1P02751 2386 aaKnown RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 IGLC1P0CG04 106 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 RPL7P18124 248 aaKnown RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 ARL3P36405 182 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 TCL1AP56279 114 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 BCL6BQ8N143 479 aaPredicted RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 DPF1Q92782 380 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 SDF2L1Q9HCN8 221 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 PRSS46E5RG02 174 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 HAX1O00165 279 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 MDKP21741 143 aaPredicted RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 RELQ04864 619 aaPredicted RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 TEX29Q8N6K0 151 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 J3QLI3 93 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 CRYGBP07316 175 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 GNG5P63218 68 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 CENPWQ5EE01 88 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 ZNF600Q6ZNG1 722 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 PRNTQ86SH4 94 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 WFDC11Q8NEX6 87 aa7.36□□□□□ -1.23
SSR3-201ENST00000265044 FAM110DQ8TAY7 271 aaPredicted RBP7.36□□□□□ -1.23
SSR3-201ENST00000265044 A0A0G2JLM5 398 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 LINC01548A6NM66 108 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 K7EIM0 57 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 DNASE2O00115 360 aaPredicted RBP7.35□□□□□ -1.23
SSR3-201ENST00000265044 FAM3BP58499 235 aaPredicted RBP7.35□□□□□ -1.23
SSR3-201ENST00000265044 SRSF1Q07955 248 aaKnown RBP eCLIP7.35□□□□□ -1.23
SSR3-201ENST00000265044 GOLT1AQ6ZVE7 132 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 GRAMD2BQ96HH9 432 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 SELENOKQ9Y6D0 94 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 A0A1W2PRE2 83 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 PPP1R2P9O14990 202 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 RPL15P61313 204 aaKnown RBP7.35□□□□□ -1.23
SSR3-201ENST00000265044 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
SSR3-201ENST00000265044 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 TTC9CQ8N5M4 171 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 AVPP01185 164 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 Q9H3A6 140 aa7.35□□□□□ -1.23
SSR3-201ENST00000265044 I3L2K1 104 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 HIST1H1EP10412 219 aaKnown RBP7.34□□□□□ -1.23
SSR3-201ENST00000265044 RAB5AP20339 215 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 NDUFA6P56556 154 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 PAX2Q02962 417 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 OR5I1Q13606 314 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
SSR3-201ENST00000265044 MORN5Q5VZ52 161 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 C11orf44Q8N8P7 122 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 THAP8Q8NA92 274 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 CTDSP1Q9GZU7 261 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 CRYBG3Q68DQ2 2970 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 ZNF98A6NK75 572 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 M0QZ24 198 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
SSR3-201ENST00000265044 LOXL1Q08397 574 aaPredicted RBP7.34□□□□□ -1.23
SSR3-201ENST00000265044 TMEM95Q3KNT9 176 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 ZNF114Q8NC26 417 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 NDFIP1Q9BT67 221 aa7.34□□□□□ -1.23
SSR3-201ENST00000265044 PEX7O00628 323 aa7.34□□□□□ -1.24
SSR3-201ENST00000265044 IGKV1-17P01599 117 aa7.34□□□□□ -1.24
SSR3-201ENST00000265044 TFPI2P48307 235 aa7.34□□□□□ -1.24
SSR3-201ENST00000265044 RPEL1Q2QD12 228 aa7.34□□□□□ -1.24
SSR3-201ENST00000265044 EXOC3-AS1Q8N2X6 119 aa7.34□□□□□ -1.24
SSR3-201ENST00000265044 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
SSR3-201ENST00000265044 FLNAP21333 2647 aaKnown RBP7.33□□□□□ -1.24
SSR3-201ENST00000265044 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 OCC1Q8TAD7 63 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 ITPR3Q14573 2671 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 IGLV11-55A0A075B6I3 123 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 VWC2LB2RUY7 222 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 TOMM40O96008 361 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 IBA57Q5T440 356 aaKnown RBP7.33□□□□□ -1.24
SSR3-201ENST00000265044 C5orf17Q8NAS9 161 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 LINC00479Q96M42 142 aa7.33□□□□□ -1.24
SSR3-201ENST00000265044 ZNF331Q9NQX6 463 aaPredicted RBP7.33□□□□□ -1.24
SSR3-201ENST00000265044 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
SSR3-201ENST00000265044 J3KRW8 73 aa7.32□□□□□ -1.24
SSR3-201ENST00000265044 SCGB2A2Q13296 93 aa7.32□□□□□ -1.24
SSR3-201ENST00000265044 PATE2Q6UY27 113 aa7.32□□□□□ -1.24
SSR3-201ENST00000265044 HIST1H2BAQ96A08 127 aa7.32□□□□□ -1.24
SSR3-201ENST00000265044 BORCS7Q96B45 105 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms