RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 TRAV2A0A0B4J234 112 aa9.52□□□□□ -0.88
PKP1-201ENST00000263946 LHFPL4Q7Z7J7 247 aa9.52□□□□□ -0.88
PKP1-201ENST00000263946 CACNG8Q8WXS5 425 aa9.52□□□□□ -0.88
PKP1-201ENST00000263946 NDUFAF3Q9BU61 184 aa9.52□□□□□ -0.88
PKP1-201ENST00000263946 FABP5P3A8MUU1 101 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 H3BTX0 84 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 ZNF48Q96MX3 618 aaPredicted RBP9.52□□□□□ -0.89
PKP1-201ENST00000263946 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 FREM1Q5H8C1 2179 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 FGF16O43320 207 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
PKP1-201ENST00000263946 LY6DQ14210 128 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 Q6P435 159 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 PCDH15Q96QU1 1955 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
PKP1-201ENST00000263946 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
PKP1-201ENST00000263946 OTORQ9NRC9 128 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
PKP1-201ENST00000263946 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
PKP1-201ENST00000263946 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 CD177Q8N6Q3 437 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 RNF138Q8WVD3 245 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
PKP1-201ENST00000263946 A0A0G2JNJ9 132 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 ZNF124Q15973 351 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 OR52E5Q8NH55 327 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 ST6GALNAC6Q969X2 333 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 Q9UFV3 132 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 FBXL7Q9UJT9 491 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 DKK1O94907 266 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 IGFBP2P18065 325 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 MOSP00540 346 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 HTN3P15516 51 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 RNASE4P34096 147 aaKnown RBP9.51□□□□□ -0.89
PKP1-201ENST00000263946 LINC00158P58513 81 aa9.51□□□□□ -0.89
PKP1-201ENST00000263946 TRBV6-6A0A0A6YYG2 114 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 TNFRSF6BO95407 300 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
PKP1-201ENST00000263946 CD28P10747 220 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 SLX1AQ9BQ83 275 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 CYTL1Q9NRR1 136 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 RPUSD1Q9UJJ7 312 aaKnown RBP9.5□□□□□ -0.89
PKP1-201ENST00000263946 ZNF503-AS2A6NEH8 195 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 IGKCP01834 107 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 SRSF3P84103 164 aaKnown RBP9.5□□□□□ -0.89
PKP1-201ENST00000263946 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 CDKN1AP38936 164 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 RPRMLQ8N4K4 120 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 CHCHD1Q96BP2 118 aaKnown RBP9.5□□□□□ -0.89
PKP1-201ENST00000263946 COQ2Q96H96 371 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 COL4A3Q01955 1670 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 Q6ZS49 121 aa9.5□□□□□ -0.89
PKP1-201ENST00000263946 IGHV3-35A0A0C4DH35 117 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 RHOGP84095 191 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 IGKV1-5P01602 117 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 RBMY1FQ15415 496 aaKnown RBP9.49□□□□□ -0.89
PKP1-201ENST00000263946 NCOR2Q9Y618 2525 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 UPK2O00526 184 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 PPP1R27Q86WC6 154 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 SEPSECSQ9HD40 501 aaKnown RBP9.49□□□□□ -0.89
PKP1-201ENST00000263946 C15orf61A6NNL5 157 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 GATA2P23769 480 aaPredicted RBP9.49□□□□□ -0.89
PKP1-201ENST00000263946 PIP4P1Q86T03 277 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 STHQ8IWL8 128 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
PKP1-201ENST00000263946 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
PKP1-201ENST00000263946 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
PKP1-201ENST00000263946 DOCK11Q5JSL3 2073 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 IGHV3OR16-10A0A075B7F0 116 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 TRGV4A0A0C4DH28 118 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 TMEM155Q4W5P6 130 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 CGAP01215 116 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 LDLRAD2Q5SZI1 272 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 TMEM170AQ8WVE7 144 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 NCOA6Q14686 2063 aaPredicted RBP9.48□□□□□ -0.89
PKP1-201ENST00000263946 IGKV1D-17A0A075B6S4 117 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 F2Z2F3 143 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 IGKV1D-33P01593 117 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 IGKV1-33P01594 117 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 CCL20P78556 96 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 RASL10AQ92737 203 aa9.48□□□□□ -0.89
PKP1-201ENST00000263946 IGKV1-6A0A0C4DH72 117 aa9.47□□□□□ -0.89
PKP1-201ENST00000263946 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms