RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 C20orf144Q9BQM9 153 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 SPTBN4Q9H254 2564 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 SRRM5B3KS81 715 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 K7ERU9 68 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 SPRY2O43597 315 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 LOXL3P58215 753 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 PLP1P60201 277 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 OR4C13Q8NGP0 309 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 TMEM160Q9NX00 188 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
PALB2-201ENST00000261584 KIR2DL5BA0A0G2JN68 375 aa8.21□□□□□ -1.09
PALB2-201ENST00000261584 KIR2DL5BA0A0G2JPC4 375 aa8.21□□□□□ -1.09
PALB2-201ENST00000261584 KIR2DL5AQ8N109 375 aa8.21□□□□□ -1.09
PALB2-201ENST00000261584 VSTM2AQ8TAG5 236 aa8.21□□□□□ -1.09
PALB2-201ENST00000261584 GPR82Q96P67 336 aa8.21□□□□□ -1.09
PALB2-201ENST00000261584 TRBV6-6A0A0A6YYG2 114 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 NPIPB5A8MRT5 1133 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 NPIPB11E5RHQ5 1161 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 RIGQ13278 110 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 UBE2V1Q13404 147 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 NRN1LQ496H8 165 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 PNKDQ8N490 385 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 WDR31Q8NA23 367 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 WFDC12Q8WWY7 111 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 S100A4P26447 101 aaKnown RBP8.21□□□□□ -1.1
PALB2-201ENST00000261584 CFHR2P36980 270 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 YPEL3P61236 119 aaPredicted RBP8.21□□□□□ -1.1
PALB2-201ENST00000261584 PRCDQ00LT1 54 aa8.21□□□□□ -1.1
PALB2-201ENST00000261584 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 C12orf54Q6X4T0 127 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 TEX43Q6ZNM6 134 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 RNF138Q8WVD3 245 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 LINC00527Q9UJ94 153 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 PTPRSQ13332 1948 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 TRBV9A0A0B4J1U6 114 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 TMEM189A5PLL7 270 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 IGHV1-46P01743 117 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 GPR183P32249 361 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 MSMPQ1L6U9 139 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 C2orf83Q53S99 150 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 COA6Q5JTJ3 125 aaKnown RBP8.2□□□□□ -1.1
PALB2-201ENST00000261584 LINC01560Q8TB33 94 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 COX11Q9Y6N1 276 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 C15orf65H3BRN8 121 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 GUSBP1Q15486 140 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 SRSF7Q16629 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
PALB2-201ENST00000261584 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
PALB2-201ENST00000261584 TACC2O95359 2948 aa8.2□□□□□ -1.1
PALB2-201ENST00000261584 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 TIMM23BQ5SRD1 257 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 DNLZQ5SXM8 178 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 IGKV2-40A0A087WW87 121 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 IGKV2D-40P01614 121 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 TDGF1P13385 188 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 COX19Q49B96 90 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 MUC22E2RYF6 1773 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 A0A1B0GWJ7 208 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 TMEM213A2RRL7 107 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 H3BVH4 76 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 BSPH1Q075Z2 132 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 AMN1Q8IY45 258 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 DMDP11532 3685 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 A0A1W2PNU3 283 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 C16orf97H3BN30 126 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 MGPP08493 103 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 GLRXP35754 106 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 IFI27P40305 119 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 RELQ04864 619 aaPredicted RBP8.19□□□□□ -1.1
PALB2-201ENST00000261584 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 OR10AG1Q8NH19 301 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 ZNF502Q8TBZ5 544 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 RITA1Q96K30 269 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 ZNF257Q9Y2Q1 563 aa8.19□□□□□ -1.1
PALB2-201ENST00000261584 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 D6R8Y8 96 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 M0R296 226 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 SAP30O75446 220 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 LIPFP07098 398 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 Q8NFD4 153 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 PRELID3AQ96N28 172 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 NHP2Q9NX24 153 aaKnown RBP8.18□□□□□ -1.1
PALB2-201ENST00000261584 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 F5H697 171 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 RBPMS2Q6ZRY4 209 aaKnown RBP8.18□□□□□ -1.1
PALB2-201ENST00000261584 RAB1CQ92928 201 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 SFXN3Q9BWM7 321 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 C9JCJ5 164 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 FTH1P19P0C7X4 201 aa8.18□□□□□ -1.1
PALB2-201ENST00000261584 SCGB1D4Q6XE38 83 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms