RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 A0A1W2PRD5 423 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 A0A1W2PRF3 423 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 A0A1W2PRM7 423 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 NCR2O95944 276 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 LHBP01229 141 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 ARF6P62330 175 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 CACNG8Q8WXS5 425 aa12.78□□□□□ -0.36
LMNB1-201ENST00000261366 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.36
LMNB1-201ENST00000261366 SAP30O75446 220 aa12.77□□□□□ -0.36
LMNB1-201ENST00000261366 ATP5L2Q7Z4Y8 100 aa12.77□□□□□ -0.36
LMNB1-201ENST00000261366 Q9H3A6 140 aa12.77□□□□□ -0.36
LMNB1-201ENST00000261366 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
LMNB1-201ENST00000261366 SCRT2Q9NQ03 307 aa12.77□□□□□ -0.37
LMNB1-201ENST00000261366 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.37
LMNB1-201ENST00000261366 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.37
LMNB1-201ENST00000261366 RIF1Q5UIP0 2472 aaKnown RBP12.77□□□□□ -0.37
LMNB1-201ENST00000261366 FSTL3O95633 263 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 C12orf54Q6X4T0 127 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 OR8A1Q8NGG7 326 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
LMNB1-201ENST00000261366 FTH1P19P0C7X4 201 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 FAM106CPP0CH98 169 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 FAM106AQ4KMX7 169 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
LMNB1-201ENST00000261366 SARAFQ96BY9 339 aa12.76□□□□□ -0.37
LMNB1-201ENST00000261366 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
LMNB1-201ENST00000261366 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 C7orf71A4D174 169 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 GPR183P32249 361 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 GUSBP1Q15486 140 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 PERPQ96FX8 193 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.75□□□□□ -0.37
LMNB1-201ENST00000261366 LIPFP07098 398 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 LYZP61626 148 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 RHOGP84095 191 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 RAB37Q96AX2 223 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 TMSB15BA0A087X1C1 80 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 PRR33A8MZF0 331 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 CRXO43186 299 aaPredicted RBP12.75□□□□□ -0.37
LMNB1-201ENST00000261366 IGHV1-46P01743 117 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 HLA-DRB1P01911 266 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 TCRAP04437 139 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 OR5AL1P0C617 328 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 ARMS2P0C7Q2 107 aa12.75□□□□□ -0.37
LMNB1-201ENST00000261366 OSR1Q8TAX0 266 aaPredicted RBP12.75□□□□□ -0.37
LMNB1-201ENST00000261366 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
LMNB1-201ENST00000261366 CHCHD1Q96BP2 118 aaKnown RBP12.75□□□□□ -0.37
LMNB1-201ENST00000261366 MYCNOSP40205 109 aa12.74□□□□□ -0.37
LMNB1-201ENST00000261366 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-201ENST00000261366 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
LMNB1-201ENST00000261366 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
LMNB1-201ENST00000261366 CFHR2P36980 270 aa12.74□□□□□ -0.37
LMNB1-201ENST00000261366 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
LMNB1-201ENST00000261366 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.379e-13■■■■■ 27.4
LMNB1-201ENST00000261366 BPIFA4PQ86YQ2 179 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 PRSS3P2Q8NHM4 247 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 PIEZO2Q9H5I5 2752 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 CNTFRP26992 372 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
LMNB1-201ENST00000261366 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 DKK4Q9UBT3 224 aa12.73□□□□□ -0.37
LMNB1-201ENST00000261366 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 TM4SF20Q53R12 229 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 OR4C13Q8NGP0 309 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 GAGE10A6NGK3 116 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 LTAP01374 205 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
LMNB1-201ENST00000261366 FAM162BQ5T6X4 162 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 ZNF474Q6S9Z5 364 aaPredicted RBP12.72□□□□□ -0.37
LMNB1-201ENST00000261366 ZNF833PQ6ZTB9 187 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 SMIM15Q7Z3B0 74 aa12.72□□□□□ -0.37
LMNB1-201ENST00000261366 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 GLRXP35754 106 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 WFDC8Q8IUA0 241 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 HSPB8Q9UJY1 196 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 IGHG3P01860 377 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 PRSS57Q6UWY2 283 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 C2orf91Q6ZV80 131 aa12.71□□□□□ -0.37
LMNB1-201ENST00000261366 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
LMNB1-201ENST00000261366 SPTBN2O15020 2390 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 H3BUT2 72 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 PPBPP02775 128 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 NHLH1Q02575 133 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 PET117Q6UWS5 81 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 SEM1Q6ZVN7 128 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 FMC1Q96HJ9 113 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 AP1S3Q96PC3 154 aa12.71□□□□□ -0.38
LMNB1-201ENST00000261366 KLF12Q9Y4X4 402 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms