RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LINC00473A8K010 186 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 F2Z2F3 143 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 CKS1BP61024 79 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 LCNL1Q6ZST4 164 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
COL8A1-201ENST00000261037 KLHL30-AS1Q8NEE0 82 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 BUB1B-PAK6H3BSN5 160 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 DSCR9P59020 149 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 BMPERQ8N8U9 685 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 GATD1Q8NB37 220 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
COL8A1-201ENST00000261037 SPAG8Q99932 426 aaPredicted RBP9.9□□□□□ -0.82
COL8A1-201ENST00000261037 STAG3L3P0CL85 134 aa9.9□□□□□ -0.83
COL8A1-201ENST00000261037 SUPT4H1P63272 117 aaKnown RBP9.9□□□□□ -0.83
COL8A1-201ENST00000261037 HEPN1Q6WQI6 88 aa9.9□□□□□ -0.83
COL8A1-201ENST00000261037 DTX2Q86UW9 622 aa9.9□□□□□ -0.83
COL8A1-201ENST00000261037 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.83
COL8A1-201ENST00000261037 ZNRD1Q9P1U0 126 aa9.9□□□□□ -0.83
COL8A1-201ENST00000261037 FGF16O43320 207 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 ERCC8Q13216 396 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 MAPK1IP1LQ8NDC0 245 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 MGAMO43451 1857 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 MPZP25189 248 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 A0A1B0GWJ7 208 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 SLC25A2Q9BXI2 301 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 CYTL1Q9NRR1 136 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 M0R2P5 195 aa9.89□□□□□ -0.83
COL8A1-201ENST00000261037 COL4A6Q14031 1691 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 IGKV1D-17A0A075B6S4 117 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 PRR30Q53SZ7 412 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-201ENST00000261037 MDS2Q8NDY4 140 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 DOCK6Q96HP0 2047 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 HEATR5BQ9P2D3 2071 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 A0A087WX48 190 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 PPBPP02775 128 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 PLNP26678 52 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 MLANAQ16655 118 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 UNQ6494/PRO21346Q6UXR6 183 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 A0A087WWL8 130 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 Q6P435 159 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 ABCA7Q8IZY2 2146 aa9.88□□□□□ -0.83
COL8A1-201ENST00000261037 B4DSR2 109 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 NTF4P34130 210 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 AGMATQ9BSE5 352 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 BPESC1Q9GZL8 116 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
COL8A1-201ENST00000261037 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 hDV102S1A0JD36 115 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 GLRX5Q86SX6 157 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 TRGV9Q99603 122 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 HIST1H2BLQ99880 126 aa9.87□□□□□ -0.83
COL8A1-201ENST00000261037 MINOS1Q5TGZ0 78 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 LHFPL1Q86WI0 220 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 MINOS1-NBL1R4GNA1 71 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 GGTLC3B5MD39 225 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 PSCAO43653 123 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 ZNF138P52744 262 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 B3GALT5-AS1P59052 145 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 PSG3Q16557 428 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 TMEM155Q4W5P6 130 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 PAX4O43316 350 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 MCRIP2Q9BUT9 160 aaKnown RBP9.86□□□□□ -0.83
COL8A1-201ENST00000261037 Q5PR19 223 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 NUP35Q8NFH5 326 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 SVILO95425 2214 aa9.86□□□□□ -0.83
COL8A1-201ENST00000261037 CFHR3Q02985 330 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 JPT2Q9H910 190 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 SRSF4Q08170 494 aaKnown RBP9.85□□□□□ -0.83
COL8A1-201ENST00000261037 NMSQ5H8A3 153 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 TEX43Q6ZNM6 134 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 M0R1W7 72 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 SAA4P35542 130 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 ZDBF2Q9HCK1 2354 aa9.85□□□□□ -0.83
COL8A1-201ENST00000261037 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-201ENST00000261037 A0A0G2JRQ6 117 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 CD5P06127 495 aa9.84□□□□□ -0.83
COL8A1-201ENST00000261037 RPP25LQ8N5L8 163 aaKnown RBP9.84□□□□□ -0.83
COL8A1-201ENST00000261037 UBE2CO00762 179 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms