RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 VWC2LB2RUY7 222 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 MPC2O95563 127 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 Q0VG73 95 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TDRG1Q3Y452 100 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GGNQ86UU5 652 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 PHYHIPLQ96FC7 376 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 B9D2Q9BPU9 175 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 CADP27708 2225 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TRAV10A0A0B4J240 114 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 INAFM2P0DMQ5 153 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 Q8TCH9 128 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 MYO18AQ92614 2054 aaKnown RBP3.29□□□□□ -1.88
RNF38-201ENST00000259605 TIAM2Q8IVF5 1701 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 SMCHD1A6NHR9 2005 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TRIP11Q15643 1979 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 A0A0G2JK05 382 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GAGE12JA6NER3 117 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 H0YL77 283 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 MMP23AO75900 390 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 C1QCP02747 245 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GAGE1Q13065 139 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GAGE4Q13068 117 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GAGE5Q13069 117 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 GAGE13Q4V321 117 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TMEM88Q6PEY1 159 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 LYZL2Q7Z4W2 148 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 Q9H3A6 140 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 IGKV3D-20A0A0C4DH25 116 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 IGKV1-8A0A0C4DH67 115 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 TGFBR3LH3BV60 316 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 LY6G6DO95868 133 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 CD55P08174 381 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 SSBP2P81877 361 aaPredicted RBP3.28□□□□□ -1.88
RNF38-201ENST00000259605 EGR4Q05215 589 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 C1orf100Q5SVJ3 147 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 ORMDL3Q8N138 153 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 GPR146Q96CH1 333 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 ACACBO00763 2458 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 QSER1Q2KHR3 1735 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 TRBV9A0A0B4J1U6 114 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 MYMXA0A1B0GTQ4 84 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 LEPROTL1O95214 131 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 IGHV4-59P01825 116 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 FABP2P12104 132 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 IER3P46695 156 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PRR20EP86478 221 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PRR20CP86479 221 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PRR20DP86480 221 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PRR20BP86481 221 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PRR20AP86496 221 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 SRSF6Q13247 344 aaKnown RBP3.28□□□□□ -1.88
RNF38-201ENST00000259605 FOXI2Q6ZQN5 318 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 NEGR1Q7Z3B1 354 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 TRPT1Q86TN4 253 aaKnown RBP3.28□□□□□ -1.88
RNF38-201ENST00000259605 GVQW1Q8N7I0 195 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 PMCHL2Q9BQD1 86 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 ALPK2Q86TB3 2170 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 NBASA2RRP1 2371 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 F8VVB4 439 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 F8VWA3 439 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 GYPEP15421 78 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 CXCL2P19875 107 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 RPL29P47914 159 aaKnown RBP3.28□□□□□ -1.88
RNF38-201ENST00000259605 CLLU1Q5K131 121 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 LYPD1Q8N2G4 141 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 SLC25A2Q9BXI2 301 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 V9GYH0 126 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 THADAQ6YHU6 1953 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 KDM3BQ7LBC6 1761 aa3.28□□□□□ -1.88
RNF38-201ENST00000259605 IGHV1-24A0A0C4DH33 117 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 PINLYPA6NC86 204 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 PRSS29PA6NIE9 313 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 LEPROTO15243 131 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 GCHFRP30047 84 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 FXYD7P58549 80 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 AMELYQ99218 206 aa3.28□□□□□ -1.89
RNF38-201ENST00000259605 TRPM7Q96QT4 1865 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 SPTBP11277 2137 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 C7orf77A4D0Y5 90 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 H3BTX0 84 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ATP6V0E1O15342 81 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 C1QBP02746 253 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ID3Q02535 119 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 SUMO4Q6EEV6 95 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TMEM136Q6ZRR5 245 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 LY6G5BQ8NDX9 201 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 PYGO2Q9BRQ0 406 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ELF5Q9UKW6 265 aaPredicted RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 F11RQ9Y624 299 aaKnown RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 PLXNB2O15031 1838 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ITGB4P16144 1822 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.27□□□□□ -1.895e-9■■■■■ 28.9
RNF38-201ENST00000259605 PIEZO1Q92508 2521 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IGHV1OR15-1A0A075B7D0 117 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TRAV8-3A0A0A6YYJ7 113 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms