RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 HIGD1AQ9Y241 93 aa13.65□□□□□ -0.22
CCDC115-201ENST00000259229 CLPSL1A2RUU4 121 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 LGALS1P09382 135 aaKnown RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 C18orf65Q6ZTR6 163 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 EIF4E3Q8N5X7 224 aaKnown RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 FAM210AQ96ND0 272 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 SLC25A39Q9BZJ4 359 aaPredicted RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 IGHV3OR16-8A0A075B7F1 116 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 NUDT19A8MXV4 375 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 H3BRN7 92 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 I3L521 148 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 PROK1P58294 105 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
CCDC115-201ENST00000259229 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
CCDC115-201ENST00000259229 RAB19A4D1S5 217 aa13.63□□□□□ -0.23
CCDC115-201ENST00000259229 CXorf1O96002 111 aa13.63□□□□□ -0.23
CCDC115-201ENST00000259229 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
CCDC115-201ENST00000259229 SHANK2-AS3Q9BTD1 123 aa13.63□□□□□ -0.23
CCDC115-201ENST00000259229 ATP6V1G1O75348 118 aa13.62□□□□□ -0.23
CCDC115-201ENST00000259229 CDX1P47902 265 aaPredicted RBP13.62□□□□□ -0.23
CCDC115-201ENST00000259229 PMS2P11Q13670 270 aa13.62□□□□□ -0.23
CCDC115-201ENST00000259229 LEMD1Q68G75 181 aa13.62□□□□□ -0.23
CCDC115-201ENST00000259229 UNQ9165/PRO28630Q6UXU0 137 aa13.62□□□□□ -0.23
CCDC115-201ENST00000259229 OR4F5Q8NH21 305 aa13.62□□□□□ -0.23
CCDC115-201ENST00000259229 NDUFA4O00483 81 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
CCDC115-201ENST00000259229 CD28P10747 220 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 GCHFRP30047 84 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 KHDC3LQ587J8 217 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 SUN5Q8TC36 379 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 RNF114Q9Y508 228 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 C9JQL5 133 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 GP9P14770 177 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 TAS2R45P59539 299 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 GUK1Q16774 197 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 PQLC2Q6ZP29 291 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 CITED4Q96RK1 184 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 RARRES2Q99969 163 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 TMEM231Q9H6L2 316 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
CCDC115-201ENST00000259229 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 SETD2Q9BYW2 2564 aaPredicted RBP13.6□□□□□ -0.23
CCDC115-201ENST00000259229 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 A0A087WW49 117 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 CD5P06127 495 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 PYYP10082 97 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 PSMB3P49720 205 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 C4orf3Q8WVX3 66 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 TMEM190Q8WZ59 177 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 RABAC1Q9UI14 185 aa13.6□□□□□ -0.23
CCDC115-201ENST00000259229 LOC102723971A0A1B0GUV8 181 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 RBFOX3A6NFN3 312 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 MRPS12O15235 138 aaKnown RBP13.59□□□□□ -0.23
CCDC115-201ENST00000259229 OR7C2O60412 319 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 BCL2P10415 239 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 ICAM4Q14773 271 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 HAGHQ16775 308 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 ZNF506Q5JVG8 444 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 FXYD5Q96DB9 178 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 U3KQE9 123 aa13.59□□□□□ -0.23
CCDC115-201ENST00000259229 OR10J4P0C629 311 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 IQCF2Q8IXL9 164 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 C11orf44Q8N8P7 122 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 WFDC12Q8WWY7 111 aa13.58□□□□□ -0.24
CCDC115-201ENST00000259229 HAX1O00165 279 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 APOHP02749 345 aaPredicted RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 CRYBB3P26998 211 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 OR51M1Q9H341 326 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 TMEM14CQ9P0S9 112 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 NIPBLQ6KC79 2804 aaeCLIP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 ZNF207O43670 478 aaKnown RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 HSPB1P04792 205 aaKnown RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 UBE2L3P68036 154 aaKnown RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 MANBALQ9NQG1 85 aa13.57□□□□□ -0.24
CCDC115-201ENST00000259229 YTHDF2Q9Y5A9 579 aaKnown RBP13.57□□□□□ -0.24
CCDC115-201ENST00000259229 BUB3O43684 328 aa13.56□□□□□ -0.24
CCDC115-201ENST00000259229 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
CCDC115-201ENST00000259229 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
CCDC115-201ENST00000259229 EIF5A2Q9GZV4 153 aaKnown RBP13.56□□□□□ -0.24
CCDC115-201ENST00000259229 ADARB2-AS1A8MUL3 147 aa13.55□□□□□ -0.24
CCDC115-201ENST00000259229 PAGE4O60829 102 aa13.55□□□□□ -0.24
CCDC115-201ENST00000259229 IGLC2P0DOY2 106 aa13.55□□□□□ -0.24
CCDC115-201ENST00000259229 HOXD3P31249 432 aaPredicted RBP13.55□□□□□ -0.24
CCDC115-201ENST00000259229 UBE2G2P60604 165 aa13.55□□□□□ -0.24
CCDC115-201ENST00000259229 RPEL1Q2QD12 228 aa13.55□□□□□ -0.24
CCDC115-201ENST00000259229 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms