RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HMGN4O00479 90 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 SPRY3O43610 288 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 IGKV1D-33P01593 117 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 IGKV1-33P01594 117 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 EFNA4P52798 201 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 CST6Q15828 149 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 ADAMTSL4Q6UY14 1074 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 DEFB106AQ8N104 65 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 SLC25A45Q8N413 288 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 RFESDQ8TAC1 157 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 ABHD14BQ96IU4 210 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 PRDM14Q9GZV8 571 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 PRSS38A1L453 326 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 TIMM23O14925 209 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 PYYP10082 97 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 LIFP15018 202 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 IGFBP3P17936 291 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-201ENST00000258733 WT1P19544 449 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-201ENST00000258733 HLA-DMBP28068 263 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 GCHFRP30047 84 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 MYCNOSP40205 109 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 RPL13AP40429 203 aaKnown RBP6.18□□□□□ -1.42
GPNMB-201ENST00000258733 UNC119Q13432 240 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 SLC48A1Q6P1K1 146 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 PILRAQ9UKJ1 303 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 DOCK7Q96N67 2140 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 CACNA1CQ13936 2221 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.18□□□□□ -1.42
GPNMB-201ENST00000258733 LYZL6O75951 148 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 PPYP01298 95 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 PQLC2Q6ZP29 291 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
GPNMB-201ENST00000258733 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
GPNMB-201ENST00000258733 TRAV26-2A0A0B4J265 109 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 SPRY2O43597 315 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 IL4P05112 153 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 CXCL8P10145 99 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 DLX1P56177 255 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 HES3Q5TGS1 186 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 DEFB123Q8N688 67 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 THADAQ6YHU6 1953 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 POLEQ07864 2286 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 C15orf62A8K5M9 175 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 SLC25A48Q6ZT89 311 aaKnown RBP6.17□□□□□ -1.42
GPNMB-201ENST00000258733 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
GPNMB-201ENST00000258733 A0A1B0GVT2 93 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 C2CD4DB7Z1M9 353 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 LOXP28300 417 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-201ENST00000258733 DUTP33316 252 aaKnown RBP6.16□□□□□ -1.42
GPNMB-201ENST00000258733 ZNF56Q15929 161 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TMEM155Q4W5P6 130 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 C1orf100Q5SVJ3 147 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 ARTNQ5T4W7 220 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 DCAF4L2Q8NA75 395 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 STARD5Q9NSY2 213 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 KLF13Q9Y2Y9 288 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-201ENST00000258733 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 IZUMO1RA6ND01 250 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 LOXL3P58215 753 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 C22orf39Q6P5X5 142 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TAS2R4Q9NYW5 299 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 MPDZO75970 2070 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TRAV17A0A0B4J275 112 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TCRAP04437 139 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 IGF1P05019 195 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 ABCA11PQ4W5N1 156 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 FAM201AQ5SY85 155 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 MFSD12Q6NUT3 480 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 Q8N1Y9 231 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 NFAM1Q8NET5 270 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-201ENST00000258733 MYOZ3Q8TDC0 251 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 C17orf77Q96MU5 243 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 IL36RNQ9UBH0 155 aa6.16□□□□□ -1.42
GPNMB-201ENST00000258733 TRAV12-2A0A075B6T6 113 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 A0A1W2PP55 124 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 TMEM150CB9EJG8 249 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 LTAP01374 205 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 CTLA4P16410 223 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 HERVK_113P61574 105 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 Q6P435 159 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 TXNDC17Q9BRA2 123 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 ZNF747Q9BV97 191 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 HES7Q9BYE0 225 aa6.15□□□□□ -1.42
GPNMB-201ENST00000258733 LSM4Q9Y4Z0 139 aaKnown RBP6.15□□□□□ -1.42
GPNMB-201ENST00000258733 EML5Q05BV3 1969 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 GLI4P10075 376 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2E1P51965 193 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 ARFRP1Q13795 201 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 ZNF525Q8N782 197 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 UBE2E2Q96LR5 201 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 ZNF442Q9H7R0 627 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 PDFQ9HBH1 243 aa6.15□□□□□ -1.43
GPNMB-201ENST00000258733 HCSTQ9UBK5 93 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms