RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZNF138P52744 262 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 TPTE2P1Q5T6R2 138 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 TMEM75Q8N9X5 138 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 OR52E5Q8NH55 327 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 PFDN5Q99471 154 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 TIMM9Q9Y5J7 89 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 NUPR1O60356 82 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 KRTDAPP60985 99 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 IBA57Q5T440 356 aaKnown RBP7.23□□□□□ -1.25
CKAP2-201ENST00000258607 KCNIP4Q6PIL6 250 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 CTDSP1Q9GZU7 261 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
CKAP2-201ENST00000258607 SERTM2A0A1B0GWG4 89 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 GGCTO75223 188 aaKnown RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 PF4V1P10720 104 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 HIST1H1BP16401 226 aaKnown RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 BPIFB3P59826 476 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 ST6GALNAC6Q969X2 333 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 PACRGQ96M98 296 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 IGKV2-40A0A087WW87 121 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 NDUFB8O95169 186 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 IGKV2D-40P01614 121 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 IGLV1-47P01700 117 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 CLEC3BP05452 202 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 CNN1P51911 297 aaKnown RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 KRTAP10-9P60411 292 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 Q6ZS46 218 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 PIP4P2Q8N4L2 257 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 TCTEX1D1Q8N7M0 179 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 DAZAP1Q96EP5 407 aaKnown RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 DMRT1Q9Y5R6 373 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 MAST4O15021 2626 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 NDUFA2O43678 99 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 BLCAPP62952 87 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 ZNF600Q6ZNG1 722 aa7.22□□□□□ -1.25
CKAP2-201ENST00000258607 LSM4Q9Y4Z0 139 aaKnown RBP7.22□□□□□ -1.25
CKAP2-201ENST00000258607 ZNF785A8K8V0 405 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 SEC14L6B5MCN3 397 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 PRSS46E5RG02 174 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 H3BUX3 64 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 ATP6V0E1O15342 81 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 ADMP35318 185 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 CEACAM3P40198 252 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 DLX6P56179 175 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 C15orf32Q32M92 178 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 TEX38Q6PEX7 206 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 C10orf99Q6UWK7 81 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.21□□□□□ -1.25
CKAP2-201ENST00000258607 ARPC1AQ92747 370 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.25
CKAP2-201ENST00000258607 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 RPL29P47914 159 aaKnown RBP7.21□□□□□ -1.26
CKAP2-201ENST00000258607 COMPP49747 757 aaPredicted RBP7.21□□□□□ -1.26
CKAP2-201ENST00000258607 SRSF2Q01130 221 aaKnown RBP7.21□□□□□ -1.26
CKAP2-201ENST00000258607 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 CHRDL1Q9BU40 450 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 SLC25A2Q9BXI2 301 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 HIF1ANQ9NWT6 349 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 F8P00451 2351 aa7.21□□□□□ -1.26
CKAP2-201ENST00000258607 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 C5orf52A6NGY3 159 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PDE6DO43924 150 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 LGALS7P47929 136 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 CLEC2AQ6UVW9 174 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 GGACTQ9BVM4 153 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 MPDU1O75352 247 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 FABP1P07148 127 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PRR20EP86478 221 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PRR20CP86479 221 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PRR20DP86480 221 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PRR20BP86481 221 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PRR20AP86496 221 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 PNRC1Q12796 327 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-201ENST00000258607 C2orf83Q53S99 150 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 Q9H3A6 140 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 IGKV1D-37A0A075B6S9 117 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 TMEM250H0YL14 139 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 CTAG1AP78358 180 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 RHOGP84095 191 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 C5orf64Q2M2E5 130 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 DPPA3Q6W0C5 159 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 KCNIP2Q9NS61 270 aa7.2□□□□□ -1.26
CKAP2-201ENST00000258607 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
CKAP2-201ENST00000258607 SRIP30626 198 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
CKAP2-201ENST00000258607 ZNF257Q9Y2Q1 563 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
CKAP2-201ENST00000258607 GATCO43716 136 aaKnown RBP7.19□□□□□ -1.26
CKAP2-201ENST00000258607 ZNF253O75346 499 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms