RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 YPEL3P61236 119 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 PRR27Q6MZM9 219 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 LINC00574Q9H8X3 128 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 STAG3L2P0CL84 134 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 STAG3L3P0CL85 134 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 MC5RP33032 325 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 UBE2L3P68036 154 aaKnown RBP11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 SSX8Q7RTT4 187 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 A1L4Q6 167 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 H0Y8G0 127 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 MT-CO2P00403 227 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 TEX43Q6ZNM6 134 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 DNAJC4Q9NNZ3 241 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 IL36BQ9NZH7 164 aa11.72□□□□□ -0.53
TRAFD1-201ENST00000257604 SUB1P53999 127 aaKnown RBP eCLIP11.71□□□□□ -0.531e-9■■■■■ 45.9
TRAFD1-201ENST00000257604 SPATA45Q537H7 98 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 Q6ZN92 141 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 TMEM167AQ8TBQ9 72 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 VPS25Q9BRG1 176 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 MYO9AB2RTY4 2548 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 ZNF253O75346 499 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 LYZP61626 148 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 STPG4Q8N801 248 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 MCRIP2Q9BUT9 160 aaKnown RBP11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 SIGLEC9Q9Y336 463 aa11.71□□□□□ -0.53
TRAFD1-201ENST00000257604 ANKRD17O75179 2603 aaKnown RBP11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 SRIP30626 198 aa11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 SAPCD1Q5SSQ6 148 aa11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 ASCL2Q99929 193 aa11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.54
TRAFD1-201ENST00000257604 A0A1W2PN81 502 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 PAFAH1B2P68402 229 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 ZNF596Q8TC21 504 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 SRSF12Q8WXF0 261 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 ZNF355PQ9NSJ1 428 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 IGLV1-47P01700 117 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 PMCHL1Q16048 86 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 RPEL1Q2QD12 228 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 FBXL19-AS1Q494R0 122 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-201ENST00000257604 M0QZK8 103 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 MFAP2P55001 183 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 C22orf15Q8WYQ4 148 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 EAF1Q96JC9 268 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 M0QZ24 198 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 SELENOTP62341 195 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 CAMPP49913 170 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 TCTAP57738 103 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 FAM168AQ92567 244 aa11.69□□□□□ -0.54
TRAFD1-201ENST00000257604 GPX1P07203 203 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 LGALS7P47929 136 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 GNG5P63218 68 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 DYNAPQ8N1N2 210 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 GNG4P50150 75 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 Q56UQ5 140 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 TECRQ9NZ01 308 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 LINC00527Q9UJ94 153 aa11.68□□□□□ -0.54
TRAFD1-201ENST00000257604 PRR20EP86478 221 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PRR20CP86479 221 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PRR20DP86480 221 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PRR20BP86481 221 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PRR20AP86496 221 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PRORYQ9H606 182 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 V9GYV3 84 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 IGLC7A0M8Q6 106 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 HELTA6NFD8 242 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 PTTG1IPP53801 180 aa11.67□□□□□ -0.54
TRAFD1-201ENST00000257604 A0A1W2PS18 150 aa11.66□□□□□ -0.54
TRAFD1-201ENST00000257604 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-201ENST00000257604 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
TRAFD1-201ENST00000257604 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
TRAFD1-201ENST00000257604 Q8N976 141 aa11.66□□□□□ -0.54
TRAFD1-201ENST00000257604 C8orf88P0DMB2 117 aa11.65□□□□□ -0.54
TRAFD1-201ENST00000257604 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms