RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PEX7O00628 323 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 OVOL1O14753 267 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 CD69Q07108 199 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 LINC01545Q5VT33 79 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 IGFBPL1Q8WX77 278 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 TMEM14DPA8MWL7 114 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 MS4A18H0YCH9 400 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 IL17RELQ6ZVW7 336 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 IGHV1OR21-1A0A087WYE8 117 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 TRAV41A0A0B4J266 112 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 ZGLP1P0C6A0 271 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 FGF6P10767 208 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 SUPT4H1P63272 117 aaKnown RBP5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 LYRM9A8MSI8 78 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 CGAP01215 116 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 SRD5A1P18405 259 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 C16orf52Q8NHV5 167 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 ARRDC1-AS1Q9H2J1 176 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 TRAV4A0A0B4J268 109 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 RPP25LQ8N5L8 163 aaKnown RBP5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 RBAKDNA6NC62 111 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 SCRT1Q9BWW7 348 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 VN1R4Q7Z5H5 301 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 OVOL2Q9BRP0 275 aa5.54□□□□□ -1.52
PDGFRA-201ENST00000257290 SHROOM3Q8TF72 1996 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 M0R135 149 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNF799Q96GE5 643 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 ARID1BQ8NFD5 2236 aaPredicted RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 HLA-DRB4P13762 266 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 SLC25A10Q9UBX3 287 aaPredicted RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 HLA-DRB4X5D2U9 266 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TRAV12-2A0A075B6T6 113 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 IGHV3-20A0A0C4DH32 117 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TIMM17BO60830 172 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 PGLYRP1O75594 196 aaPredicted RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 EMDP50402 254 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TFF3Q07654 80 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 SPACA3Q8IXA5 215 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 CALYQ9NYX4 217 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 SLC25A48Q6ZT89 311 aaKnown RBP5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 GFI1Q99684 422 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 KLK15Q9H2R5 256 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 MPC1Q9Y5U8 109 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 TTC3P53804 2025 aa5.53□□□□□ -1.52
PDGFRA-201ENST00000257290 C3orf36Q3SXR2 165 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 RPS19BP1Q86WX3 136 aaKnown RBP5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 E9PLN8 166 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 IGHV5-51A0A0C4DH38 117 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 CCL21O00585 134 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 LHFPL1Q86WI0 220 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 SFTPA2Q8IWL1 248 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 PATJQ8NI35 1801 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 ELANEP08246 267 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 TIRAPP58753 221 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 GUSBP11Q6P575 273 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 PCP2Q8IVA1 136 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 TRBV25-1A0A075B6N4 114 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 F6UB75 175 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 TCRAP04437 139 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 CRYGSP22914 178 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF493Q6ZR52 646 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 PLEKHB2Q96CS7 222 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 SCARF2Q96GP6 870 aaPredicted RBP5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 FMC1Q96HJ9 113 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 DSCR8Q96T75 97 aa5.52□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM90A10PA6NDY2 464 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM90A8PA6NJQ4 464 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 E9PQ18 207 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF561-AS1K7EIQ3 104 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 MRPL33O75394 65 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 FAM90A24PP0C7X0 464 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 PEBP1P30086 187 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 LINC00312Q9Y6C7 94 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 PIKFYVEQ9Y2I7 2098 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 J3QRE1 110 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 CELA2AP08217 269 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 ZNF138P52744 262 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 TFF2Q03403 129 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 CD164Q04900 197 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 SOCS3O14543 225 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 CCL11P51671 97 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 LY6DQ14210 128 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 F5H697 171 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 CXCL13O43927 109 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 CRYGBP07316 175 aa5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 DUTP33316 252 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-201ENST00000257290 LINC01620Q4KN68 170 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms