RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
RFX1-201ENST00000254325 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
RFX1-201ENST00000254325 SLC25A39Q9BZJ4 359 aaPredicted RBP12.56□□□□□ -0.4
RFX1-201ENST00000254325 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
RFX1-201ENST00000254325 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
RFX1-201ENST00000254325 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
RFX1-201ENST00000254325 BPESC1Q9GZL8 116 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■■■■ 28.2
RFX1-201ENST00000254325 INS-IGF2F8WCM5 200 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 CLEC2AQ6UVW9 174 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 TMEM116Q8NCL8 245 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 GRAMD2BQ96HH9 432 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 PATE2Q6UY27 113 aa12.55□□□□□ -0.4
RFX1-201ENST00000254325 TCAPO15273 167 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 ATP5J2P56134 94 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 OR2T8A6NH00 312 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 PAFAH1B2P68402 229 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
RFX1-201ENST00000254325 NDFIP1Q9BT67 221 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 MINOS1Q5TGZ0 78 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 C11orf42Q8N5U0 333 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 FXYD5Q96DB9 178 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 FAM167A-AS1Q96KT0 104 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
RFX1-201ENST00000254325 CCL19Q99731 98 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 PIMREGQ9BSJ6 248 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 MINOS1-NBL1R4GNA1 71 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 GOSR1O95249 250 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 ASPHD1Q5U4P2 390 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 TMSB15BA0A087X1C1 80 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 SERF1AO75920 110 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
RFX1-201ENST00000254325 V9GYV3 84 aa12.53□□□□□ -0.4
RFX1-201ENST00000254325 BOD1L1Q8NFC6 3051 aa12.52□□□□□ -0.4
RFX1-201ENST00000254325 HIGD1CA8MV81 97 aa12.52□□□□□ -0.4
RFX1-201ENST00000254325 TBX15Q96SF7 602 aa12.52□□□□□ -0.4
RFX1-201ENST00000254325 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 OR11H6Q8NGC7 330 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 RABAC1Q9UI14 185 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 CACNA1AO00555 2505 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 FAM168AQ92567 244 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
RFX1-201ENST00000254325 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.41
RFX1-201ENST00000254325 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 TCRAP04437 139 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 RPL7P18124 248 aaKnown RBP12.51□□□□□ -0.41
RFX1-201ENST00000254325 GPR183P32249 361 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 JOSD1Q15040 202 aaPredicted RBP12.51□□□□□ -0.41
RFX1-201ENST00000254325 VN1R17PQ8TDU5 208 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 BMPR1BO00238 502 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 TCF24Q7RTU0 167 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
RFX1-201ENST00000254325 HIVEP3Q5T1R4 2406 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
RFX1-201ENST00000254325 IGKV1D-37A0A075B6S9 117 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 NEU1Q99519 415 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 LOC400499M0QZD8 3231 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 IGHV3OR16-13A0A075B7E8 117 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 IGHV3-74A0A0B4J1X5 117 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 TEX22C9J3V5 150 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 LY6EQ16553 131 aa12.5□□□□□ -0.41
RFX1-201ENST00000254325 H0Y8G0 127 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 SAA4P35542 130 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 IFITM10A6NMD0 228 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 DDTP30046 118 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 VPS25Q9BRG1 176 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 DSCAML1Q8TD84 2053 aa12.49□□□□□ -0.41
RFX1-201ENST00000254325 SSBP4Q9BWG4 385 aaPredicted RBP12.49□□□□□ -0.41
RFX1-201ENST00000254325 CBY3A6NI87 242 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 SH2D7A6NKC9 451 aaPredicted RBP12.48□□□□□ -0.41
RFX1-201ENST00000254325 M0R2Z0 102 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 CSN3P07498 182 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
RFX1-201ENST00000254325 FAM208BQ5VWN6 2430 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 ACACBO00763 2458 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 ZNF25P17030 456 aaPredicted RBP12.48□□□□□ -0.41
RFX1-201ENST00000254325 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
RFX1-201ENST00000254325 HBBP68871 147 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 RHOGP84095 191 aa12.48□□□□□ -0.41
RFX1-201ENST00000254325 RIGQ13278 110 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms