RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 NIPSNAP3BQ9BS92 247 aa9.15□□□□□ -0.94
LIN28A-201ENST00000254231 ZNF257Q9Y2Q1 563 aa9.15□□□□□ -0.94
LIN28A-201ENST00000254231 PGPA6NDG6 321 aa9.15□□□□□ -0.95
LIN28A-201ENST00000254231 FABP4P15090 132 aa9.15□□□□□ -0.95
LIN28A-201ENST00000254231 DPF1Q92782 380 aa9.15□□□□□ -0.95
LIN28A-201ENST00000254231 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.95
LIN28A-201ENST00000254231 IFNA1P01562 189 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 HBE1P02100 147 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 MT-ND4LP03901 98 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 PKD1L1Q8TDX9 2849 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 MFAP4P55083 255 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 SERF2P84101 59 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 DEFA6Q01524 100 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 C2orf83Q53S99 150 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 STXBP6Q8NFX7 210 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 Q8WTZ3 238 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 H3BQ15 152 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 CD81P60033 236 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 DLK1P80370 383 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 OR52E5Q8NH55 327 aa9.14□□□□□ -0.95
LIN28A-201ENST00000254231 PHOX2AO14813 284 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 FGF16O43320 207 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 BCL2P10415 239 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 FRZBQ92765 325 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 PITPNC1Q9UKF7 332 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 CA1P00915 261 aaPredicted RBP9.13□□□□□ -0.95
LIN28A-201ENST00000254231 RPLP1P05386 114 aaKnown RBP9.13□□□□□ -0.95
LIN28A-201ENST00000254231 DSCR9P59020 149 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 MEF2BQ02080 365 aaPredicted RBP9.13□□□□□ -0.95
LIN28A-201ENST00000254231 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 ZNF48Q96MX3 618 aaPredicted RBP9.13□□□□□ -0.95
LIN28A-201ENST00000254231 NAGKQ9UJ70 344 aa9.13□□□□□ -0.95
LIN28A-201ENST00000254231 CYSRT1A8MQ03 144 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 PPP1R2P9O14990 202 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 GCHFRP30047 84 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 RAB5CP51148 216 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 MRGPRG-AS1Q2M3A8 158 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 HIGD1AQ9Y241 93 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 TIMM9Q9Y5J7 89 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 COLCA2A8K830 154 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 BPIFB3P59826 476 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 ICAM4Q14773 271 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 RNF182Q8N6D2 247 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 TBL2Q9Y4P3 447 aaKnown RBP9.12□□□□□ -0.95
LIN28A-201ENST00000254231 YTHDF2Q9Y5A9 579 aaKnown RBP9.12□□□□□ -0.95
LIN28A-201ENST00000254231 TGIF2-C20orf24A0A0A6YYL0 155 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 ZNF705FA8MVS1 300 aaPredicted RBP9.12□□□□□ -0.95
LIN28A-201ENST00000254231 K7EIM0 57 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 FAM3BP58499 235 aaPredicted RBP9.12□□□□□ -0.95
LIN28A-201ENST00000254231 ETFRF1Q6IPR1 90 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 OR1L4Q8NGR5 311 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 PIFOQ8TCI5 191 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 TMEM68Q96MH6 324 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 GPR61Q9BZJ8 451 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
LIN28A-201ENST00000254231 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 MBP02144 154 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 APOHP02749 345 aaPredicted RBP9.11□□□□□ -0.95
LIN28A-201ENST00000254231 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 TCRBV4S1A1TA0A5B7 111 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 AP4M1O00189 453 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 CLN5O75503 358 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 TRGC2P03986 189 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 POU2AF1Q16633 256 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
LIN28A-201ENST00000254231 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
LIN28A-201ENST00000254231 SLC17A3O00476 420 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 IGKV1-17P01599 117 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 ARL3P36405 182 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 BATFQ16520 125 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 TM4SF20Q53R12 229 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 PATE2Q6UY27 113 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 PQLC2Q6ZP29 291 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 PARLQ9H300 379 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 OR51M1Q9H341 326 aa9.11□□□□□ -0.95
LIN28A-201ENST00000254231 GGCTO75223 188 aaKnown RBP9.1□□□□□ -0.95
LIN28A-201ENST00000254231 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 GOLT1AQ6ZVE7 132 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 OR4X2Q8NGF9 303 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 NDUFS6O75380 124 aaKnown RBP9.1□□□□□ -0.95
LIN28A-201ENST00000254231 FXYD7P58549 80 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 TAS2R45P59539 299 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 GAR1Q9NY12 217 aaKnown RBP9.1□□□□□ -0.95
LIN28A-201ENST00000254231 FUT9Q9Y231 359 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 S100A8P05109 93 aa9.1□□□□□ -0.95
LIN28A-201ENST00000254231 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms