RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 K7EQM0 130 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 ZNF138P52744 262 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 LINC00322Q6ZN03 302 aaPredicted RBP16.49■□□□□ 0.23
RARA-201ENST00000254066 C1orf229Q6ZS94 237 aaPredicted RBP16.49■□□□□ 0.23
RARA-201ENST00000254066 PPP1R32Q7Z5V6 425 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 ZADH2Q8N4Q0 377 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 MPV17P39210 176 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 ZNF137PP52743 207 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 GNG5P63218 68 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 OR5AN1Q8NGI8 311 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 CITED1Q99966 193 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 MYOD1P15172 320 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 SAMD5Q5TGI4 173 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 PATE2Q6UY27 113 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 ITLN1Q8WWA0 313 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 GTSF1LQ9H1H1 148 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 PI4KAP42356 2102 aa16.48■□□□□ 0.23
RARA-201ENST00000254066 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 SAA2P0DJI9 122 aaPredicted RBP16.47■□□□□ 0.23
RARA-201ENST00000254066 FOXI2Q6ZQN5 318 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 SLC25A48Q6ZT89 311 aaKnown RBP16.47■□□□□ 0.23
RARA-201ENST00000254066 PIP4P1Q86T03 277 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 PERPQ96FX8 193 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 TEX48A0A1B0GUV7 120 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 PGPA6NDG6 321 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 NCR2O95944 276 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 SMIM13P0DJ93 91 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 RPL24P83731 157 aaKnown RBP16.47■□□□□ 0.23
RARA-201ENST00000254066 MZT1Q08AG7 82 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 GCSAMQ8N6F7 178 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 CALYQ9NYX4 217 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 SIGLEC8Q9NYZ4 499 aa16.47■□□□□ 0.23
RARA-201ENST00000254066 CT45A10P0DMU9 189 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CGB3P0DN86 165 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CGB7P0DN87 165 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 MLANAQ16655 118 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CT45A1Q5HYN5 189 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CT45A3Q8NHU0 189 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 PIFOQ8TCI5 191 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CITED2Q99967 270 aaPredicted RBP16.46■□□□□ 0.23
RARA-201ENST00000254066 HILPDAQ9Y5L2 63 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CELA3AP09093 270 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 RIGQ13278 110 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 THAP8Q8NA92 274 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 PRSS3P2Q8NHM4 247 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 TMEM190Q8WZ59 177 aa16.46■□□□□ 0.23
RARA-201ENST00000254066 CACNA1DQ01668 2161 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 ERHP84090 104 aaKnown RBP16.45■□□□□ 0.22
RARA-201ENST00000254066 SPATA25Q9BR10 227 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 CT45A6P0DMU7 189 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 CT45A5P0DMU8 189 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 CT45A7P0DMV0 189 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 DEFB124Q8NES8 71 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 BLNKQ8WV28 456 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 RAB37Q96AX2 223 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 THYN1Q9P016 225 aa16.45■□□□□ 0.22
RARA-201ENST00000254066 A0A1B0GUT8 65 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 GAGE12HA6NDE8 117 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 IGHV3-7P01780 117 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 CSN3P07498 182 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 SPINK14Q6IE38 97 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 MEF2CQ06413 473 aaPredicted RBP16.44■□□□□ 0.22
RARA-201ENST00000254066 TMEM164Q5U3C3 297 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 INO80CQ6PI98 192 aaPredicted RBP16.44■□□□□ 0.22
RARA-201ENST00000254066 VGLL1Q99990 258 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 NAA38Q9BRA0 125 aaKnown RBP16.44■□□□□ 0.22
RARA-201ENST00000254066 HIGD1BQ9P298 99 aa16.44■□□□□ 0.22
RARA-201ENST00000254066 F8W1H4 67 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 CD59P13987 128 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 HOXA4Q00056 320 aaPredicted RBP16.43■□□□□ 0.22
RARA-201ENST00000254066 LINC00696Q6ZRV3 163 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 PIP4P2Q8N4L2 257 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 INSIG2Q9Y5U4 225 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 COL8A1P27658 744 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 PRR31Q5SQ13 230 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 LINC00305Q7Z4B0 112 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 SAP25Q8TEE9 199 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 FSCN3Q9NQT6 498 aa16.43■□□□□ 0.22
RARA-201ENST00000254066 NCOR2Q9Y618 2525 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 IGKV1D-17A0A075B6S4 117 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 TRBV6-1A0A0K0K1D8 114 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 OVOL3O00110 214 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 TCRAP04437 139 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 YAE1D1Q9NRH1 226 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 NDUFA4L2Q9NRX3 87 aa16.42■□□□□ 0.22
RARA-201ENST00000254066 SRRM5B3KS81 715 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 ZNF207O43670 478 aaKnown RBP16.41■□□□□ 0.22
RARA-201ENST00000254066 CACNA1EQ15878 2313 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 CFHR2P36980 270 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 MAGEA5P43359 124 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 RBMXL3Q8N7X1 1067 aaKnown RBP16.41■□□□□ 0.22
RARA-201ENST00000254066 TTTY12Q9BZ98 90 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 SS18L2Q9UHA2 77 aa16.41■□□□□ 0.22
RARA-201ENST00000254066 TIMM8AO60220 97 aaPredicted RBP16.4■□□□□ 0.22
RARA-201ENST00000254066 IGHV3-13P01766 116 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 CCL4P13236 92 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 C17orf58Q2M2W7 97 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 TMEM30BQ3MIR4 351 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 Q6AWC8 147 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms