RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GREB1Q4ZG55 1949 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGKV1-9A0A0C4DH69 117 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 TM4SF5O14894 197 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGKV1D-43A0A0B4J1Z2 117 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 SP9P0CG40 484 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNF138P52744 262 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGLV3-21P80748 117 aaPredicted RBP10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGKV3-20P01619 116 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNF236Q9UL36 1845 aa10.91□□□□□ -0.66
PCDHGA3-201ENST00000253812 CCL25O15444 150 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV1-24A0A0C4DH33 117 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 PRCDQ00LT1 54 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 HGFACQ04756 655 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 PDCD11Q14690 1871 aaKnown RBP10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 A0A0A6YYD4 124 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 PPIFP30405 207 aaKnown RBP10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 UTF1Q5T230 341 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 FBXL15Q9H469 300 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 MED12Q93074 2177 aa10.9□□□□□ -0.66
PCDHGA3-201ENST00000253812 TIAF1O95411 115 aa10.9□□□□□ -0.67
PCDHGA3-201ENST00000253812 TMEM258P61165 79 aa10.9□□□□□ -0.67
PCDHGA3-201ENST00000253812 TMEM158Q8WZ71 300 aa10.9□□□□□ -0.67
PCDHGA3-201ENST00000253812 SLC25A39Q9BZJ4 359 aaPredicted RBP10.9□□□□□ -0.67
PCDHGA3-201ENST00000253812 KIR2DL5BA0A0G2JN68 375 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 KIR2DL5BA0A0G2JPC4 375 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 KIR2DL5AQ8N109 375 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 RNASE8Q8TDE3 154 aaKnown RBP10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 C1QTNF5Q9BXJ0 243 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 SCN8AQ9UQD0 1980 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 PRR32B1ATL7 298 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 YPEL1O60688 119 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 YPEL2Q96QA6 119 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 IGHV3-49A0A0A0MS15 119 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 NABP1Q96AH0 204 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 LAMTOR3Q9UHA4 124 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 LRRC37A2A6NM11 1700 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 A0A087WV48 116 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 H3BMG7 143 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 TCRAP04437 139 aa10.89□□□□□ -0.67
PCDHGA3-201ENST00000253812 IGHV1-45A0A0A0MS14 117 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 ARHGEF17Q96PE2 2063 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 RNASE4P34096 147 aaKnown RBP10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 NRN1LQ496H8 165 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 MRPL20Q9BYC9 149 aaKnown RBP10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 MUC6Q6W4X9 2439 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 FXYD7P58549 80 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 LINC00158P58513 81 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
PCDHGA3-201ENST00000253812 DUX5Q96PT3 197 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 CD7P09564 240 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 LCNL1Q6ZST4 164 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 DEFB125Q8N687 156 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 SRSF8Q9BRL6 282 aaKnown RBP10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 SOCS3O14543 225 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 IGLV3-19P01714 112 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 ANK1P16157 1881 aa10.87□□□□□ -0.67
PCDHGA3-201ENST00000253812 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 IGLC7A0M8Q6 106 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 TAL2Q16559 108 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 DUTP33316 252 aaKnown RBP10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 TMEM42Q69YG0 159 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 SRXN1Q9BYN0 137 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 GFRA4Q9GZZ7 299 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 JPT2Q9H910 190 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 PRR33A8MZF0 331 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 CELA3AP09093 270 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 RSPO4Q2I0M5 234 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 S4R3C0 116 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 SIVA1O15304 175 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 PAX4O43316 350 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
PCDHGA3-201ENST00000253812 NPC2P61916 151 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 WNK2Q9Y3S1 2297 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 DUX3Q96PT4 197 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 AHRRA9YTQ3 701 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 VCYO14598 125 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 LGALS9BQ3B8N2 356 aa10.85□□□□□ -0.67
PCDHGA3-201ENST00000253812 LGALS9CQ6DKI2 356 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms