RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 KLK10O43240 276 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 PSG1P11464 419 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 RPUSD1Q9UJJ7 312 aaKnown RBP9.67□□□□□ -0.86
USHBP1-201ENST00000252597 EPDR1Q9UM22 224 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF257Q9Y2Q1 563 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
USHBP1-201ENST00000252597 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 GLRXP35754 106 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 NHLH1Q02575 133 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 HES1Q14469 280 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 KLF17Q5JT82 389 aaPredicted RBP9.66□□□□□ -0.86
USHBP1-201ENST00000252597 FAM167A-AS1Q96KT0 104 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF891A8MT65 544 aaPredicted RBP9.66□□□□□ -0.86
USHBP1-201ENST00000252597 A8MWL6 223 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 NDUFB3O43676 98 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 Q9H3A6 140 aa9.66□□□□□ -0.86
USHBP1-201ENST00000252597 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
USHBP1-201ENST00000252597 CUBNO60494 3623 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 VMA21Q3ZAQ7 101 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 SLC25A34Q6PIV7 304 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 FA2HQ7L5A8 372 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 ZADH2Q8N4Q0 377 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 PERPQ96FX8 193 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 GAL3ST2Q9H3Q3 398 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 M0R3E3 92 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 CTRLP40313 264 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 UBE2V1Q13404 147 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 MBNL2Q5VZF2 373 aaKnown RBP9.65□□□□□ -0.86
USHBP1-201ENST00000252597 OR4C13Q8NGP0 309 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 IGF2BP2-AS1Q96M15 143 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 TMEM191AQ9H0A3 160 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
USHBP1-201ENST00000252597 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.86
USHBP1-201ENST00000252597 A0A1W2PPI3 338 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
USHBP1-201ENST00000252597 C2orf83Q53S99 150 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 IGFL4Q6B9Z1 124 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 C18orf15Q96N68 181 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 GPR82Q96P67 336 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 FAM90A9PA6NNJ1 464 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 TMEM249Q2WGJ8 235 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 COX19Q49B96 90 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 TMEM200BQ69YZ2 307 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 C17orf77Q96MU5 243 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 TCRBV4S1A1TA0A5B7 111 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 H0YJW9 148 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 FTH1P19P0C7X4 201 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 GAGE1Q13065 139 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 ASCL5Q7RTU5 278 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
USHBP1-201ENST00000252597 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.63□□□□□ -0.87
USHBP1-201ENST00000252597 NMUP48645 174 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 FXYD5Q96DB9 178 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 CHRDL1Q9BU40 450 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 PLSCR4Q9NRQ2 329 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 ESDP10768 282 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 RPL27AP46776 148 aaKnown RBP9.63□□□□□ -0.87
USHBP1-201ENST00000252597 LRRC10Q5BKY1 277 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 SLC25A48Q6ZT89 311 aaKnown RBP9.63□□□□□ -0.87
USHBP1-201ENST00000252597 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 LY96Q9Y6Y9 160 aa9.63□□□□□ -0.87
USHBP1-201ENST00000252597 PPIAL4EA0A075B759 164 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 PPIAL4FP0DN26 164 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 CD40P25942 277 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 ARF6P62330 175 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 MRPL32Q9BYC8 188 aaKnown RBP9.62□□□□□ -0.87
USHBP1-201ENST00000252597 INSIG2Q9Y5U4 225 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 RIPPLY3P57055 190 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 SEM1Q6ZVN7 128 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 C22orf46C9J442 243 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
USHBP1-201ENST00000252597 COTL1Q14019 142 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 OSR1Q8TAX0 266 aaPredicted RBP9.62□□□□□ -0.87
USHBP1-201ENST00000252597 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
USHBP1-201ENST00000252597 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 K7EM74 188 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 LY6HO94772 140 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 PRSS57Q6UWY2 283 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 ZNF788Q6ZQV5 615 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 CFHR2P36980 270 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 ANKRD39Q53RE8 183 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 TIMM23BQ5SRD1 257 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 VSTM2AQ8TAG5 236 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 RASL11BQ9BPW5 248 aa9.61□□□□□ -0.87
USHBP1-201ENST00000252597 HIGD1AQ9Y241 93 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms