RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
SIN3B-201ENST00000248054 HIGD1CA8MV81 97 aa12.89□□□□□ -0.35
SIN3B-201ENST00000248054 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
SIN3B-201ENST00000248054 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
SIN3B-201ENST00000248054 STPG4Q8N801 248 aa12.89□□□□□ -0.35
SIN3B-201ENST00000248054 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
SIN3B-201ENST00000248054 TRAV9-2A0A087WT02 112 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 CCL25O15444 150 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 PPBPP02775 128 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 IL15RAQ13261 267 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 GGTLC1Q9BX51 225 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 FAM159AQ6UWV7 190 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 BUB1B-PAK6H3BSN5 160 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 ASIPP42127 132 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 SGK494Q96LW2 274 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 ASCL2Q99929 193 aa12.88□□□□□ -0.35
SIN3B-201ENST00000248054 HTN1P15515 57 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 PAX1P15863 534 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 FER1L6-AS1Q8NA97 138 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 WIPF3A6NGB9 483 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 Q6ZWC4 215 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 H3BTX0 84 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
SIN3B-201ENST00000248054 Q6ZVH6 145 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 OCC1Q8TAD7 63 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 PRTN3P24158 256 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 COL8A2P25067 703 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 C5orf24Q7Z6I8 188 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
SIN3B-201ENST00000248054 SNAI2O43623 268 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 RNF125Q96EQ8 232 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
SIN3B-201ENST00000248054 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 UBE2L6O14933 153 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 TGFAP01135 160 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 WNT2P09544 360 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 TRGV9Q99603 122 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
SIN3B-201ENST00000248054 ST20Q9HBF5 79 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
SIN3B-201ENST00000248054 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
SIN3B-201ENST00000248054 GPR183P32249 361 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 Q6ZRM9 215 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 C8orf46Q8TAG6 207 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 NXT2Q9NPJ8 142 aaKnown RBP12.84□□□□□ -0.35
SIN3B-201ENST00000248054 KAAG1Q9UBP8 84 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 CHD3Q12873 2000 aaKnown RBP12.84□□□□□ -0.35
SIN3B-201ENST00000248054 ICE1Q9Y2F5 2266 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 LINC01551Q86U37 167 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 MS4A6AQ9H2W1 248 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 GATA2P23769 480 aaPredicted RBP12.84□□□□□ -0.35
SIN3B-201ENST00000248054 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
SIN3B-201ENST00000248054 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 RNASE7Q9H1E1 156 aaKnown RBP12.84□□□□□ -0.35
SIN3B-201ENST00000248054 DKK4Q9UBT3 224 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
SIN3B-201ENST00000248054 C15orf65H3BRN8 121 aa12.83□□□□□ -0.35
SIN3B-201ENST00000248054 MPV17L2Q567V2 206 aa12.83□□□□□ -0.35
SIN3B-201ENST00000248054 LIME1Q9H400 295 aa12.83□□□□□ -0.35
SIN3B-201ENST00000248054 B4DSR2 109 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 OR10W1Q8NGF6 305 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 C3orf79P0CE67 100 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 TEX43Q6ZNM6 134 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.36
SIN3B-201ENST00000248054 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 HBDP02042 147 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 SLC25A16P16260 332 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 CACNG7P62955 275 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 TDRG1Q3Y452 100 aa12.83□□□□□ -0.36
SIN3B-201ENST00000248054 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 C5orf64Q2M2E5 130 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 ZNF56Q15929 161 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 MGST2Q99735 147 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
SIN3B-201ENST00000248054 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
SIN3B-201ENST00000248054 H3BUT2 72 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 OR5AN1Q8NGI8 311 aa12.82□□□□□ -0.36
SIN3B-201ENST00000248054 PRSS22Q9GZN4 317 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms