RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 P01737 135 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 DEFB109BQ30KR1 87 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 H1FXQ92522 213 aaKnown RBP9.91□□□□□ -0.82
NUP88-201ENST00000225696 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
NUP88-201ENST00000225696 ZNF318Q5VUA4 2279 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 MUC21A0A0G2JKD1 596 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 MUC21A0A140T8X8 626 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 OR2T8A6NH00 312 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 K7EP13 123 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 TCRAP04437 139 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 CSN3P07498 182 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 MUC21Q5SSG8 566 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 Q9H3A6 140 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 ZNF835Q9Y2P0 537 aa9.91□□□□□ -0.82
NUP88-201ENST00000225696 A8MWL6 223 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 CD40P25942 277 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 VAMP3Q15836 100 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 EXOC3-AS1Q8N2X6 119 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 OR4C5Q8NGB2 326 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 C22orf15Q8WYQ4 148 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 PERPQ96FX8 193 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 GAL3ST2Q9H3Q3 398 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 RNF24Q9Y225 148 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 SSUH2Q9Y2M2 353 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 TTC28Q96AY4 2481 aa9.9□□□□□ -0.82
NUP88-201ENST00000225696 LOC102724200A0A096LPH7 203 aaPredicted RBP9.9□□□□□ -0.83
NUP88-201ENST00000225696 SNAI2O43623 268 aa9.9□□□□□ -0.83
NUP88-201ENST00000225696 ENSAO43768 121 aaKnown RBP9.9□□□□□ -0.83
NUP88-201ENST00000225696 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.83
NUP88-201ENST00000225696 BVES-AS1Q5T3Y7 98 aa9.9□□□□□ -0.83
NUP88-201ENST00000225696 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.83
NUP88-201ENST00000225696 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.83
NUP88-201ENST00000225696 MALRD1Q5VYJ5 2156 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 A0A087X0K7 114 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 CRYGCP07315 174 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 SUB1P53999 127 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP88-201ENST00000225696 RNF151Q2KHN1 245 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 RBPMS2Q6ZRY4 209 aaKnown RBP9.89□□□□□ -0.83
NUP88-201ENST00000225696 ST20Q9HBF5 79 aa9.89□□□□□ -0.83
NUP88-201ENST00000225696 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
NUP88-201ENST00000225696 CBY3A6NI87 242 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 KLK10O43240 276 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 LRRC10Q5BKY1 277 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 C5orf17Q8NAS9 161 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 PRNTQ86SH4 94 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 TEX45Q8NA69 505 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 VSTM2AQ8TAG5 236 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 CCL17Q92583 94 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 CHCHD1Q96BP2 118 aaKnown RBP9.88□□□□□ -0.83
NUP88-201ENST00000225696 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 SCRT2Q9NQ03 307 aa9.88□□□□□ -0.83
NUP88-201ENST00000225696 CHEK1O14757 476 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 NCR2O95944 276 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 PSG1P11464 419 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 COL8A1P27658 744 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 GOLT1AQ6ZVE7 132 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 Q86TA4 180 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 ZADH2Q8N4Q0 377 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 NEU4Q8WWR8 484 aaPredicted RBP9.87□□□□□ -0.83
NUP88-201ENST00000225696 DAZAP1Q96EP5 407 aaKnown RBP9.87□□□□□ -0.83
NUP88-201ENST00000225696 C1RLQ9NZP8 487 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 OTOGLQ3ZCN5 2332 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 SPAARA0A1B0GVQ0 90 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 NPIPB6E9PJ23 425 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 K7EM74 188 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 CDKN1BP46527 198 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 MEF2CQ06413 473 aaPredicted RBP9.87□□□□□ -0.83
NUP88-201ENST00000225696 ADIPOQQ15848 244 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 TMEM30BQ3MIR4 351 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 CT83Q5H943 113 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 STXBP6Q8NFX7 210 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 OR4A5Q8NH83 315 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 TRGV9Q99603 122 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 SELENOKQ9Y6D0 94 aa9.87□□□□□ -0.83
NUP88-201ENST00000225696 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 NBL1P41271 181 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 LYZP61626 148 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 TMEM116Q8NCL8 245 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 PRSS33Q8NF86 280 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 TMEM186Q96B77 213 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 SMIM12Q96EX1 92 aa9.86□□□□□ -0.83
NUP88-201ENST00000225696 TRAV30A0A087WSZ9 112 aa9.85□□□□□ -0.83
NUP88-201ENST00000225696 C17orf100A8MU93 164 aa9.85□□□□□ -0.83
NUP88-201ENST00000225696 LOXP28300 417 aaPredicted RBP9.85□□□□□ -0.83
NUP88-201ENST00000225696 DLX6P56179 175 aa9.85□□□□□ -0.83
NUP88-201ENST00000225696 RHOGP84095 191 aa9.85□□□□□ -0.83
NUP88-201ENST00000225696 TCF15Q12870 199 aa9.85□□□□□ -0.83
NUP88-201ENST00000225696 PIP4P1Q86T03 277 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms