RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
PAF1-201ENST00000221265 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
PAF1-201ENST00000221265 FOXC2Q99958 501 aa11.94□□□□□ -0.5
PAF1-201ENST00000221265 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
PAF1-201ENST00000221265 IGHV3-21A0A0B4J1V1 117 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 C9JCJ5 164 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 FSHBP01225 129 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
PAF1-201ENST00000221265 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 PACRGQ96M98 296 aaPredicted RBP11.93□□□□□ -0.5
PAF1-201ENST00000221265 SLC25A33Q9BSK2 321 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 C1RLQ9NZP8 487 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 OR7C2O60412 319 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 HLA-DRB1P01911 266 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 AMY1AP04745 511 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 C8orf88P0DMB2 117 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.5
PAF1-201ENST00000221265 DEFB112Q30KQ8 113 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
PAF1-201ENST00000221265 RBM14Q96PK6 669 aaKnown RBP11.93□□□□□ -0.5
PAF1-201ENST00000221265 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
PAF1-201ENST00000221265 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
PAF1-201ENST00000221265 NF1P21359 2839 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 CRYBB3P26998 211 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 TAS2R45P59539 299 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 FAM167A-AS1Q96KT0 104 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 WNT10AQ9GZT5 417 aa11.92□□□□□ -0.5
PAF1-201ENST00000221265 IGKV1D-37A0A075B6S9 117 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 TRAV5A0A0B4J249 113 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 AMBPP02760 352 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 OR10J4P0C629 311 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 BTF3L4Q96K17 158 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
PAF1-201ENST00000221265 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 CUBNO60494 3623 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
PAF1-201ENST00000221265 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 MRPL32Q9BYC8 188 aaKnown RBP11.91□□□□□ -0.5
PAF1-201ENST00000221265 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 TRAPPC1Q9Y5R8 145 aa11.91□□□□□ -0.5
PAF1-201ENST00000221265 HELTA6NFD8 242 aa11.9□□□□□ -0.5
PAF1-201ENST00000221265 SLC17A3O00476 420 aa11.9□□□□□ -0.5
PAF1-201ENST00000221265 IL17RELQ6ZVW7 336 aa11.9□□□□□ -0.5
PAF1-201ENST00000221265 THAP8Q8NA92 274 aa11.9□□□□□ -0.5
PAF1-201ENST00000221265 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
PAF1-201ENST00000221265 MOB4Q9Y3A3 225 aa11.9□□□□□ -0.5
PAF1-201ENST00000221265 A6NDX4 124 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 ATP6V0E1O15342 81 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 IGHV4-59P01825 116 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.51
PAF1-201ENST00000221265 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.51
PAF1-201ENST00000221265 ZNF90Q03938 601 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 OR5I1Q13606 314 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 CENPWQ5EE01 88 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 PATE2Q6UY27 113 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 RNF2Q99496 336 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 IL36BQ9NZH7 164 aa11.9□□□□□ -0.51
PAF1-201ENST00000221265 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 TCRBV4S1A1TA0A5B7 111 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 RD3LP0DJH9 198 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 CNN1P51911 297 aaKnown RBP11.89□□□□□ -0.51
PAF1-201ENST00000221265 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 PFDN5Q99471 154 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 PRDM13Q9H4Q3 707 aa11.89□□□□□ -0.51
PAF1-201ENST00000221265 GNG4P50150 75 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 ZNF48Q96MX3 618 aaPredicted RBP11.88□□□□□ -0.51
PAF1-201ENST00000221265 COX7A2P2O60397 106 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 CRYGCP07315 174 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 YPEL3P61236 119 aaPredicted RBP11.88□□□□□ -0.51
PAF1-201ENST00000221265 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 TNFRSF19Q9NS68 423 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 V9GYV3 84 aa11.88□□□□□ -0.51
PAF1-201ENST00000221265 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 G3V318 75 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 I3L2K1 104 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 BPIFB3P59826 476 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 UBE2L3P68036 154 aaKnown RBP11.87□□□□□ -0.51
PAF1-201ENST00000221265 C10orf113Q5VZT2 155 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 Q6ZS46 218 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 GSX1Q9H4S2 264 aaPredicted RBP11.87□□□□□ -0.51
PAF1-201ENST00000221265 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 S4R3C0 116 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 TRAV9-1A0A075B6T8 112 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 IGLV2-8P01709 118 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 PYYP10082 97 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 BLCAPP62952 87 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 TTC9CQ8N5M4 171 aa11.87□□□□□ -0.51
PAF1-201ENST00000221265 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms