RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 LEPROTO15243 131 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
UBR5-201ENST00000220959 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 FCN3O75636 299 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 DEFB104AQ8WTQ1 72 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 LINC00477Q96M19 166 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 SLC25A39Q9BZJ4 359 aaPredicted RBP12.28□□□□□ -0.44
UBR5-201ENST00000220959 SMPXQ9UHP9 88 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 H3BUX3 64 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 KLRD1Q13241 179 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 HAPLN4Q86UW8 402 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 VCYO14598 125 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 ZNF138P52744 262 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 TPTE2P1Q5T6R2 138 aa12.28□□□□□ -0.44
UBR5-201ENST00000220959 HSD52Q0P140 79 aa12.27□□□□□ -0.44
UBR5-201ENST00000220959 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.45
UBR5-201ENST00000220959 LSM4Q9Y4Z0 139 aaKnown RBP12.27□□□□□ -0.45
UBR5-201ENST00000220959 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
UBR5-201ENST00000220959 ZNF625Q96I27 306 aaPredicted RBP12.27□□□□□ -0.45
UBR5-201ENST00000220959 LURAP1LQ8IV03 231 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 A0A1B0GTI1 187 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 IGFBP3P17936 291 aaPredicted RBP12.26□□□□□ -0.45
UBR5-201ENST00000220959 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 EXOC3-AS1Q8N2X6 119 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 PARP14Q460N5 1801 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 PSME4Q14997 1843 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 NDPQ00604 133 aa12.26□□□□□ -0.45
UBR5-201ENST00000220959 PSG1P11464 419 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
UBR5-201ENST00000220959 GNLYP22749 145 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 TRAV5A0A0B4J249 113 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 IL18BPO95998 194 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 TIMP3P35625 211 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 MED13Q9UHV7 2174 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 EREGO14944 169 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 C2orf82Q6UX34 121 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 A8MXK9 166 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 ESDP10768 282 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 TNFRSF6BO95407 300 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 OCIAD2Q56VL3 154 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 LYZL4Q96KX0 146 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
UBR5-201ENST00000220959 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
UBR5-201ENST00000220959 TGFBR3LH3BV60 316 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 D6R8Y8 96 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 PRTN3P24158 256 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 OOSP1A8MZH6 123 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 TMEM190Q8WZ59 177 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 NCR2O95944 276 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 IGLV3-19P01714 112 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 C9orf139Q6ZV77 190 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 IFITM2Q01629 132 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 RNF126Q9BV68 326 aa12.24□□□□□ -0.45
UBR5-201ENST00000220959 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 TMEM178BH3BS89 294 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 FOXF2Q12947 444 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 TCRAP04437 139 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
UBR5-201ENST00000220959 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
UBR5-201ENST00000220959 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 CGB3P0DN86 165 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 MYMXA0A1B0GTQ4 84 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 LINC01356Q8N9X3 169 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 GREB1Q4ZG55 1949 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 IGLV3-12A0A075B6K2 115 aa12.23□□□□□ -0.45
UBR5-201ENST00000220959 DOCK4Q8N1I0 1966 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 RNF222A6NCQ9 220 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 DEFB130BP0DP73 79 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 DEFB130AP0DP74 79 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 LCN12Q6JVE5 192 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 SCN10AQ9Y5Y9 1956 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 CFHR1Q03591 330 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 SNHG12Q9BXW3 62 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 M0R1W7 72 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 SSBP2P81877 361 aaPredicted RBP12.22□□□□□ -0.45
UBR5-201ENST00000220959 LYZL1Q6UWQ5 148 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 LINC00114Q6XXX2 140 aa12.22□□□□□ -0.45
UBR5-201ENST00000220959 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms