RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
PTPRA-201ENST00000216877 CHAC1Q9BUX1 264 aa11.92□□□□□ -0.5
PTPRA-201ENST00000216877 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
PTPRA-201ENST00000216877 SSR4P51571 173 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 GAGE5Q13069 117 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 GAGE6Q13070 117 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 CITED1Q99966 193 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 OCIAD1Q9NX40 245 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 hADV38S2A0JD32 116 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 KLRC4-KLRK1H3BQV0 150 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 CFHR2P36980 270 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 C10orf113Q5VZT2 155 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
PTPRA-201ENST00000216877 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
PTPRA-201ENST00000216877 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
PTPRA-201ENST00000216877 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 P0C879 139 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 FGF6P10767 208 aa11.91□□□□□ -0.5
PTPRA-201ENST00000216877 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
PTPRA-201ENST00000216877 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 LILRA5A6NI73 299 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 LIFP15018 202 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
PTPRA-201ENST00000216877 C1orf159Q96HA4 380 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 SPATA25Q9BR10 227 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 HCFC1P51610 2035 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 FOLR3P41439 243 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PTH2Q96A98 100 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 GPR82Q96P67 336 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
PTPRA-201ENST00000216877 IGHV3-21A0A0B4J1V1 117 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PRR20EP86478 221 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PRR20CP86479 221 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PRR20DP86480 221 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PRR20BP86481 221 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 PRR20AP86496 221 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
PTPRA-201ENST00000216877 HSPE1P61604 102 aaKnown RBP11.89□□□□□ -0.51
PTPRA-201ENST00000216877 C5orf64Q2M2E5 130 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 DUTP33316 252 aaKnown RBP11.89□□□□□ -0.51
PTPRA-201ENST00000216877 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 OR1L4Q8NGR5 311 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 IGKV1OR2-108A0A075B7D4 117 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 SIVA1O15304 175 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 PSMB2P49721 201 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 ALKBH6Q3KRA9 238 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 CACNG8Q8WXS5 425 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
PTPRA-201ENST00000216877 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 TMEM189A5PLL7 270 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 A6NJY4 79 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 APELAP0DMC3 54 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 PROK2Q9HC23 129 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 AGRNO00468 2067 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 IGLL5B9A064 214 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
PTPRA-201ENST00000216877 A0A1B0GXF2 115 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 TMPRSS3P57727 454 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 FADS6Q8N9I5 356 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 LOXL2Q9Y4K0 774 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 D6R8Y8 96 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 CFHR1Q03591 330 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 RIGQ13278 110 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 FAM231DQ6ZW35 169 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 Q8TCH9 128 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 NPIPB3Q92617 1050 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 CADP27708 2225 aa11.87□□□□□ -0.51
PTPRA-201ENST00000216877 XGP55808 180 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 ABHD17BQ5VST6 288 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 ASPMQ8IZT6 3477 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 FNDC10F2Z333 226 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 RPS19BP1Q86WX3 136 aaKnown RBP11.86□□□□□ -0.51
PTPRA-201ENST00000216877 FREM2Q5SZK8 3169 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 VSTM5A8MXK1 200 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 RFPL3SP0C7P2 107 aa11.86□□□□□ -0.51
PTPRA-201ENST00000216877 DDB2Q92466 427 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms