RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TRAV41A0A0B4J266 112 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 PGPA6NDG6 321 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 A6NDX4 124 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 OR2T8A6NH00 312 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 G3V318 75 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
VRK1-201ENST00000216639 KRTAP10-9P60411 292 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 K7EN84 100 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 TGFAP01135 160 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 AVPP01185 164 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 LY6EQ16553 131 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 C5orf17Q8NAS9 161 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 ZNF502Q8TBZ5 544 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 EEF1AKMT3Q96AZ1 226 aa13.61□□□□□ -0.23
VRK1-201ENST00000216639 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
VRK1-201ENST00000216639 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 PPP5D1E7EU14 171 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 GGCTO75223 188 aaKnown RBP13.6□□□□□ -0.23
VRK1-201ENST00000216639 AMY1AP04745 511 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 S100A9P06702 114 aaKnown RBP13.6□□□□□ -0.23
VRK1-201ENST00000216639 CTSGP08311 255 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
VRK1-201ENST00000216639 ERVFC1-1P60608 527 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 IGF2BP2-AS1Q96M15 143 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 Q9H3A6 140 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 OTORQ9NRC9 128 aa13.6□□□□□ -0.23
VRK1-201ENST00000216639 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 FOXL1Q12952 345 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
VRK1-201ENST00000216639 Q5PR19 223 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 FLNCQ14315 2725 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 GCGP01275 180 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 UBE2G1P62253 170 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 ATG101Q9BSB4 218 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 ZNF586Q9NXT0 402 aa13.59□□□□□ -0.23
VRK1-201ENST00000216639 SOX21Q9Y651 276 aaPredicted RBP13.59□□□□□ -0.23
VRK1-201ENST00000216639 UBR5O95071 2799 aaPredicted RBP13.58□□□□□ -0.23
VRK1-201ENST00000216639 FAM223BA6NKX1 122 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 BMPR1BO00238 502 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 IGF1P05019 195 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 GPR183P32249 361 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 TMEM183BQ1AE95 376 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 FAM223AQ8IWN6 122 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 CMTM2Q8TAZ6 248 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 ATP6V0BQ99437 205 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
VRK1-201ENST00000216639 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 MYO18BQ8IUG5 2567 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 TRGC2P03986 189 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 CLEC3BP05452 202 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 MGST1P10620 155 aaKnown RBP13.57□□□□□ -0.24
VRK1-201ENST00000216639 FAM3BP58499 235 aaPredicted RBP13.57□□□□□ -0.24
VRK1-201ENST00000216639 GNG5P63218 68 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 BAGE2Q86Y30 109 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 LYPD1Q8N2G4 141 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 CHRDL1Q9BU40 450 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 IL36BQ9NZH7 164 aa13.57□□□□□ -0.24
VRK1-201ENST00000216639 TRBV19A0A075B6N1 114 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 TRAV9-1A0A075B6T8 112 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 J3QKU1 62 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 ISLRO14498 428 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 IGHG2P01859 326 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 SNRPEP62304 92 aaKnown RBP13.56□□□□□ -0.24
VRK1-201ENST00000216639 OR5I1Q13606 314 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 PRSS57Q6UWY2 283 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 MBD6Q96DN6 1003 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 FMC1Q96HJ9 113 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 LINC00479Q96M42 142 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 RPH3ALQ9UNE2 315 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 C5orf52A6NGY3 159 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 H3BTX0 84 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 H3BUA1 57 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 AP4M1O00189 453 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 IGLV2-8P01709 118 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 TCRAP04437 139 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 TYMSP04818 313 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 IGHV4-31P0DP07 118 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 ADMP35318 185 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 MAPK1IP1LQ8NDC0 245 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
VRK1-201ENST00000216639 PLA2G2AP14555 144 aa13.55□□□□□ -0.24
VRK1-201ENST00000216639 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
VRK1-201ENST00000216639 PDE6HQ13956 83 aa13.55□□□□□ -0.24
VRK1-201ENST00000216639 RPEL1Q2QD12 228 aa13.55□□□□□ -0.24
VRK1-201ENST00000216639 CLEC19AQ6UXS0 136 aa13.55□□□□□ -0.24
VRK1-201ENST00000216639 GNB4Q9HAV0 340 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms