RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Usf3B2RUQ2 2221 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tpsb2P21845 276 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Mas1P30554 324 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Mcpt8P43430 247 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Wasf3Q8VHI6 501 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm15440D3Z3P4 90 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Nxpe5E0CX47 564 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm16519F8VQK7 162 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr898L7N1Z5 316 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Cks2P56390 79 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Cfhr1Q61406 343 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Cstl1Q80Y72 140 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tmprss11dQ8VHK8 417 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tbx19Q99ME7 446 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tmem50aQ9CXL1 157 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Q9DAF8 208 aa12.18□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Trav5-1A0A075B5Z7 114 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tcrg-C4A0A075B6C7 190 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Fndc10A2A9Q0 223 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm45692D3Z0A0 150 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tppp2Q0P5Y3 170 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Zic3Q62521 466 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hes7Q8BKT2 225 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm9837Q8C607 126 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tusc5Q8C838 173 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr979Q8VH10 311 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr638Q8VH20 321 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Rgs11Q9Z2H1 443 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm14443A2ARX0 610 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm6594J3QM43 95 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prdx2Q61171 198 aaKnown RBP12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 SspnQ62147 216 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr1341Q7TQV4 312 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 9430097D07RikQ8BS47 195 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prss35Q8C0F9 409 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tmbim7Q9D592 302 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Slurp1Q9Z0K7 110 aa12.17□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm17669F6QL70 154 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Ankrd66J3QNN4 192 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 CckarO08786 436 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tmem184aQ3UFJ6 425 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Q80VP5 184 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm26558Q8BLW8 286 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr1384Q8VFA8 318 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Lmo1Q924W9 156 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 P2ry6Q9ERK9 328 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr893K7N678 312 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gabra6P16305 453 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tnfrsf1aP25118 454 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Q3U1D9 316 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 C030005K15RikQ8BQN9 115 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr827Q8VEV5 322 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prss30Q9QYZ9 310 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Egr4Q9WUF2 478 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr588-ps1A0A1B0GSZ2 313 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr62L7MU75 315 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Ca2P00920 260 aaKnown RBP12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prkar2aP12367 401 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Wnt5bP22726 359 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prop1P97458 223 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Defb20Q30KP3 96 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Spcs3Q6ZWQ7 180 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Olfr504Q7TRU7 318 aa12.16□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Gm42420A0A0J9YUQ2 99 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Fthl17bA2AHC5 176 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Fthl17cA2AHC6 176 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Rps16P14131 146 aaKnown RBP12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Ccl11P48298 97 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Fthl17fQ3SXD2 176 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 AgaQ64191 346 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 ErasQ7TN89 227 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Tmem56Q8CGF5 276 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Golt1aQ9DCQ3 133 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Rhox7aA2A4F1 281 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Bet1lO35153 111 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hbb-bh0P04443 147 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hist1h2bfP10853 126 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Il11P47873 199 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hist1h2bbQ64475 126 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 St8sia3Q64689 380 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 FarsaQ8C0C7 508 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hist1h2bkQ8CGP1 126 aaKnown RBP12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Hist1h2bpQ8CGP2 126 aaKnown RBP12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Prodh2Q8VCZ9 456 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Mus81Q91ZJ0 551 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Mrps36Q9CQX8 102 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Cst10Q9JM84 148 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Timm9Q9WV98 89 aaKnown RBP12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 G6pc2Q9Z186 355 aa12.15□□□□□ -0.46
Rnf4-207ENSMUST00000182709 Med12A2AGH6 2190 aa12.15□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Olfr175-ps1A0A140T8K4 308 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Rsg1A2A825 258 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Rpl29P47915 160 aaKnown RBP12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 OsmP53347 263 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Sys1Q78S06 156 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Wdyhv1Q80WB5 209 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Timm21Q8CCM6 249 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Atg101Q9D8Z6 218 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Gm3550W4VSN7 160 aa12.14□□□□□ -0.47
Rnf4-207ENSMUST00000182709 Zfyve26Q5DU37 2529 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms