RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Rhox7aA2A4F1 281 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mgst2A2RST1 147 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm12886B1AZM5 119 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 BC030500E9Q6W0 185 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ifitm7G3X9Z2 141 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 H3BKT1 185 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Dnajc5P60904 198 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ube2zQ3UE37 356 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm21943Q5FWD5 227 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Zfp36l3Q5ISE2 725 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1371Q7TQT7 311 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr875Q7TRE5 310 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 B130006D01RikQ8BRH6 153 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tmem186Q9CR76 216 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Fam162bQ9CX19 157 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Lamp5Q9D387 280 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr930Q9EQ99 308 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Igkv18-36A0A075B5M9 114 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Zfp334A2A4U6 679 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm14548E9Q1Z6 680 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Pira2F8VQ94 680 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Obox6G3X9U1 347 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm20821J3QPJ2 227 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr194L7N1Y8 306 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr203L7N205 307 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm26727M0QWT1 121 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 MscO88940 201 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gpm6aP35802 278 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Atp5iQ06185 71 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Zfp7Q3TFZ4 685 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trav5d-4Q5R1F6 114 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r183Q8K3N5 305 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r233Q8R294 319 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cmtm2bQ9DAC0 210 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 St6galnac6Q9JM95 333 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Timm10bQ9WV96 100 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ndufa7Q9Z1P6 113 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm14214V9GX35 225 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trbv12-2A0A0B4J1H1 124 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 C2cd4aE9Q861 334 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm21746J3QMM6 180 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Grk6O70293 576 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Emp2O88662 172 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mtatp6P00848 226 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Adrb3P25962 400 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Spam1P48794 512 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm12253Q5NC48 229 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 PnlipQ6P8U6 465 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr335-psQ7TRY6 312 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 TxnipQ8BG60 397 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cdc34Q8CFI2 235 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gpr84Q8CIM5 396 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Commd9Q8K2Q0 198 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cisd1Q91WS0 108 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Sfxn4Q925N1 313 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mrps11Q9DCA2 191 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trav12d-3A0A075B6A4 115 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm38303A0A0A6YWW8 100 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Lrrc3cA0A1B0GRI5 255 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm45871A0A1B0GRI9 540 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Pwwp2bE9Q9M8 600 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm2663F6R7E8 247 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm5129F6YHA9 99 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm20532G3UXR8 106 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tnfsf11O35235 316 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ifna4P07351 186 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 PpyP10601 100 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Pdcd6P12815 191 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Hspb7P35385 169 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 UngP97931 306 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Arl14eplQ3UKZ7 152 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cxcl17Q5UW37 119 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Grb2Q60631 217 aaKnown RBP6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Poc1bQ8BHD1 476 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cdcp2Q8BQH6 427 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tox4Q8BU11 619 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr473Q8VG44 310 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 1810009J06RikQ9CPN7 247 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mrpl51Q9CPY1 128 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Flywch2Q9CQE9 139 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Aaed1Q9D1A0 226 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Fkbp1bQ9Z2I2 108 aa6.47□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r224E9PWK2 298 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm10803Q3TZS6 135 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Samt2Q497M0 247 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Hspb6Q5EBG6 162 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 SriQ6P069 198 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Smim12Q78RX3 92 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Zfp455Q7M6X9 461 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 1700001K19RikQ80ZT1 219 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Pxt1Q8K459 51 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mbnl3Q8R003 342 aaKnown RBP6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Syngr3Q8R191 229 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r202Q8R259 302 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr642Q924X8 314 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 CsQ9CZU6 464 aaKnown RBP6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Lsm4Q9QXA5 137 aaKnown RBP6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tbl1xQ9QXE7 527 aa6.46□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ighv1-54A0A075B5W5 117 aa6.46□□□□□ -1.38
Bdnf-209ENSMUST00000111050 Gm20422E9PUR3 255 aa6.46□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms