RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm19410A0A140LJC7 2098 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Gm20422E9PUR3 255 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Cib3Q0P523 160 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Adam11Q9R1V4 773 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Ninj1O70131 152 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Rbx1P62878 108 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Fam160a2Q3U2I3 975 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Taar3Q5QD16 343 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 PaxxQ8K0Y7 205 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Tax1bp3Q9DBG9 124 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Rgs11Q9Z2H1 443 aa14.21□□□□□ -0.13
Ctcf-201ENSMUST00000005841 Shisa6Q3UH99 525 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Nxph1Q61200 271 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 GfralQ6SJE0 393 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Vwc2Q8C8N3 324 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Dnaja3Q99M87 480 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 PyyQ9EPS2 98 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Mnx1Q9QZW9 404 aa14.21□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr1248A0A1L1SSZ5 307 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Dkk1O54908 272 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zfand5O88878 213 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zfp970Q08BU3 522 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Slc25a26Q5U680 274 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Msl2Q69ZF8 577 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Slc46a1Q6PEM8 459 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Plcxd3Q8BLJ3 321 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Ifi27l2bQ8VC49 283 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Abhd14aQ922Q6 247 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Tmem54Q9D7S1 219 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Cmtm2bQ9DAC0 210 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Trav12d-3A0A075B6A4 115 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm21244J3QK38 227 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Bcl2l2P70345 193 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Tex52Q3TTI8 308 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Cadm4Q8R464 388 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr984Q8VFN1 314 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gpr87Q99MT7 358 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Wnt16Q9QYS1 364 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 AtmQ62388 3066 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr1116E9PXB8 307 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Lef1P27782 397 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 PkibQ04758 92 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 NmsQ5H8A1 153 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 BsxQ810B3 232 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr355Q8VFP6 310 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Sval2Q99N75 144 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Fbxo6Q9QZN4 295 aa14.2□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Vps13cQ8BX70 3748 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Dock9Q8BIK4 2055 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm15821A6X8J8 139 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm2663F6R7E8 247 aaKnown RBP14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm20708H3BKF4 155 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Rps19bp1Q8C6B9 143 aaKnown RBP14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 1810009J06RikQ9CPN7 247 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zdbf2Q5SS00 2493 aaKnown RBP14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 H60bB1B212 251 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr196E9PYP4 309 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Ifna4P07351 186 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Pate2Q3UW31 111 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm1527Q3V0P3 650 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Vstm2bQ9JME9 285 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Chst5Q9QUP4 395 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 CcsQ9WU84 274 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Igkv1-135A0A0B4J1H7 120 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm6594J3QM43 95 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zglp1Q1WG82 266 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 SordQ64442 357 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Atp6v1fQ9D1K2 119 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Urm1Q9D2P4 101 aa14.19□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Cdc34bA0A140T8I4 237 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm13769A2ATW2 309 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zfp971A2BFG8 470 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm14288E9Q9W0 88 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm20532G3UXR8 106 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Ascl5M0QWB7 188 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Sh2d1bO35324 132 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Bmpr1bP36898 502 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Zdhhc23Q5Y5T3 425 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Tmem164Q6PHN7 296 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr138Q7TRI7 312 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Fam180aQ8BR21 173 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Vmn1r26Q8R2D7 339 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Ube2cQ9D1C1 179 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Gm4133K9J7G6 307 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Sfxn4Q925N1 313 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 SpenQ62504 3644 aaKnown RBP14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Lrrc37aB1AWG4 3215 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr465-ps1A0A0U1RPZ4 315 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr191L7N1Z8 309 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Fgf7P36363 194 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Rac1P63001 192 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Q504N7 393 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Cdc34Q8CFI2 235 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Stac2Q8R1B0 408 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 FibinQ9CQS3 217 aa14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Rpl7l1Q9D8M4 246 aaKnown RBP14.18□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr779E9PUS9 130 aa14.17□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Olfr137Q8VFC2 312 aa14.17□□□□□ -0.14
Ctcf-201ENSMUST00000005841 S1pr5Q91X56 400 aa14.17□□□□□ -0.14
Ctcf-201ENSMUST00000005841 Tspan2Q922J6 221 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms