RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 ZNF236Q9UL36 1845 aa16.27■□□□□ 0.2
KCNMA1-293ENST00000640969 OR9G4Q8NGQ1 327 aa16.27■□□□□ 0.19
KCNMA1-293ENST00000640969 TPRP12270 2363 aaKnown RBP16.27■□□□□ 0.19
KCNMA1-293ENST00000640969 COLCA2A8K830 154 aa16.27■□□□□ 0.19
KCNMA1-293ENST00000640969 CYTL1Q9NRR1 136 aa16.27■□□□□ 0.19
KCNMA1-293ENST00000640969 IGHV3-73A0A0B4J1V6 119 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 TMEM238C9JI98 176 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 DTX2Q86UW9 622 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 MGST2Q99735 147 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 SLC25A39Q9BZJ4 359 aaPredicted RBP16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 MTCL1Q9Y4B5 1905 aaKnown RBP16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 NEUROG3Q9Y4Z2 214 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 TNS1Q9HBL0 1735 aaKnown RBP16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 TMEM155Q4W5P6 130 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 LYZL1Q6UWQ5 148 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 DEFB104AQ8WTQ1 72 aa16.26■□□□□ 0.19
KCNMA1-293ENST00000640969 PSG1P11464 419 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 VMO1Q7Z5L0 202 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 GATD1Q8NB37 220 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 NAA38Q9BRA0 125 aaKnown RBP16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 RCHY1Q96PM5 261 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 CST9LQ9H4G1 147 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 HGFACQ04756 655 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 LINC01549A6NIU2 74 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 C15orf32Q32M92 178 aa16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 RPUSD1Q9UJJ7 312 aaKnown RBP16.25■□□□□ 0.19
KCNMA1-293ENST00000640969 FXYD7P58549 80 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 IGKV1-27A0A075B6S5 117 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 FOXF2Q12947 444 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 TMEM200BQ69YZ2 307 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 MESP1Q9BRJ9 268 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 TCRAP04437 139 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 SPTBP11277 2137 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 A0A1B0GW64 132 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 LHFPL1Q86WI0 220 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 PRADC1Q9BSG0 188 aa16.24■□□□□ 0.19
KCNMA1-293ENST00000640969 SELLP14151 372 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 LINC01559Q495D7 138 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 METRNQ9UJH8 293 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 NABP1Q96AH0 204 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 AGMATQ9BSE5 352 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 LTBRP36941 435 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 FOXG1P55316 489 aaPredicted RBP16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 SUPT4H1P63272 117 aaKnown RBP16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 ACTL10Q5JWF8 245 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 PRTN3P24158 256 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 LINC01551Q86U37 167 aa16.23■□□□□ 0.19
KCNMA1-293ENST00000640969 RP1P56715 2156 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 TOMM40O96008 361 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 IGHV1-8P0DP01 117 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 KLRD1Q13241 179 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 ZNF876PQ49A33 203 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 BCL6BQ8N143 479 aaPredicted RBP16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 TRAV1-1A0A0B4J248 108 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 IGHV1-3A0A0C4DH29 117 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 GAS1P54826 345 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 TMEM219Q86XT9 240 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 TRAV3A0A0B4J244 114 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 SRRM5B3KS81 715 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 GUSBP1Q15486 140 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 RASL11AQ6T310 242 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 SH2D1AO60880 128 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 ZNF474Q6S9Z5 364 aaPredicted RBP16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 JPT2Q9H910 190 aa16.22■□□□□ 0.19
KCNMA1-293ENST00000640969 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 A0A1B0GWJ7 208 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 hDV102S1A0JD36 115 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 E9PLN8 166 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 EFNA2O43921 213 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 TPTE2P1Q5T6R2 138 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 CD177Q8N6Q3 437 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 GGNQ86UU5 652 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 PLEKHB2Q96CS7 222 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 TRGV9Q99603 122 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 DPH3P1Q9H4G8 78 aa16.21■□□□□ 0.19
KCNMA1-293ENST00000640969 SAP30O75446 220 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 ZFP36L1Q07352 338 aaKnown RBP16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 TMEM190Q8WZ59 177 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 RFNGQ9Y644 331 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 PAX4O43316 350 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 IGKV1-5P01602 117 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 MST1P26927 711 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 HIST1H4AP62805 103 aaKnown RBP16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
KCNMA1-293ENST00000640969 PSPNO60542 156 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 C1orf194Q5T5A4 169 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 TEX43Q6ZNM6 134 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 NUP35Q8NFH5 326 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 ZFAND6Q6FIF0 208 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 LSM4Q9Y4Z0 139 aaKnown RBP16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 HEATR5BQ9P2D3 2071 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 GAGE2BQ13066 116 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 GAGE2EQ4V326 116 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 RPP25LQ8N5L8 163 aaKnown RBP16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 GAGE2DQ9UEU5 116 aa16.19■□□□□ 0.18
KCNMA1-293ENST00000640969 ZNF138P52744 262 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms