RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 TM4SF5O14894 197 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
PAX6-280ENST00000640872 WT1-ASQ06250 92 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 CT83Q5H943 113 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 FAM216BQ8N7L0 139 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 GTSF1Q8WW33 167 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 GPR82Q96P67 336 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 MRPL36Q9P0J6 103 aaKnown RBP11.03□□□□□ -0.64
PAX6-280ENST00000640872 RNF7Q9UBF6 113 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 SOX21Q9Y651 276 aaPredicted RBP11.03□□□□□ -0.64
PAX6-280ENST00000640872 PTPRZ1P23471 2315 aaPredicted RBP11.03□□□□□ -0.64
PAX6-280ENST00000640872 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 ZNF788Q6ZQV5 615 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 CCL13Q99616 98 aa11.03□□□□□ -0.64
PAX6-280ENST00000640872 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 MOSP00540 346 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 PLAUP00749 431 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.65
PAX6-280ENST00000640872 CD24P25063 80 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 VAMP3Q15836 100 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 BVES-AS1Q5T3Y7 98 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 DEFB108BQ8NET1 73 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 LEPROTL1O95214 131 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 APOA2P02652 100 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 GLRXP35754 106 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
PAX6-280ENST00000640872 ADGRG4Q8IZF6 3080 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 KALRNO60229 2985 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 INTS1Q8N201 2190 aaKnown RBP11.01□□□□□ -0.65
PAX6-280ENST00000640872 PGPA6NDG6 321 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 A8MWL6 223 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
PAX6-280ENST00000640872 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 DEFB125Q8N687 156 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 RBMXL3Q8N7X1 1067 aaKnown RBP11.01□□□□□ -0.65
PAX6-280ENST00000640872 OR5AN1Q8NGI8 311 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 WASHC3Q9Y3C0 194 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 M0R1B8 84 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 NUDT3O95989 172 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 LTAP01374 205 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 COTL1Q14019 142 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 VHLLQ6RSH7 139 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 ERASQ7Z444 233 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 STXBP6Q8NFX7 210 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 PGLYRP4Q96LB8 373 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
PAX6-280ENST00000640872 PPBPP02775 128 aa11□□□□□ -0.65
PAX6-280ENST00000640872 ALKBH2Q6NS38 261 aa11□□□□□ -0.65
PAX6-280ENST00000640872 ZCCHC24Q8N2G6 241 aaKnown RBP11□□□□□ -0.65
PAX6-280ENST00000640872 OR4A5Q8NH83 315 aa11□□□□□ -0.65
PAX6-280ENST00000640872 PERPQ96FX8 193 aa11□□□□□ -0.65
PAX6-280ENST00000640872 GFRA4Q9GZZ7 299 aa11□□□□□ -0.65
PAX6-280ENST00000640872 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
PAX6-280ENST00000640872 GSX1Q9H4S2 264 aaPredicted RBP11□□□□□ -0.65
PAX6-280ENST00000640872 DYSFO75923 2080 aa11□□□□□ -0.65
PAX6-280ENST00000640872 LOC102724200A0A096LPH7 203 aaPredicted RBP10.99□□□□□ -0.65
PAX6-280ENST00000640872 P01737 135 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 FLYWCH2Q96CP2 140 aaKnown RBP10.99□□□□□ -0.65
PAX6-280ENST00000640872 FMC1Q96HJ9 113 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 NDFIP1Q9BT67 221 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 ZNF835Q9Y2P0 537 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 LINC00312Q9Y6C7 94 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 hADV38S2A0JD32 116 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 C22orf46C9J442 243 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 IGHV1-46P01743 117 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 HLA-DRB1P01911 266 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 LIPFP07098 398 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 OR5AL1P0C617 328 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.65
PAX6-280ENST00000640872 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
PAX6-280ENST00000640872 RBPMS2Q6ZRY4 209 aaKnown RBP10.99□□□□□ -0.65
PAX6-280ENST00000640872 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 TNFAIP6P98066 277 aaPredicted RBP10.98□□□□□ -0.65
PAX6-280ENST00000640872 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 RUSC1-AS1Q66K80 236 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 CUL9Q8IWT3 2517 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 CADP27708 2225 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 OR2T8A6NH00 312 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 ORM2P19652 201 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 ZNF137PP52743 207 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms