RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 C1RLQ9NZP8 487 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 METRNQ9UJH8 293 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 POLR3KQ9Y2Y1 108 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 NCBP2LA6PVI3 153 aaKnown RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 HCP5Q6MZN7 132 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 FAM231DQ6ZW35 169 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 NPIPB3Q92617 1050 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 FAM122AQ96E09 287 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 PGLYRP4Q96LB8 373 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 K7ERU9 68 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 TCF21O43680 179 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 POU2AF1Q16633 256 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF833PQ6ZTB9 187 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 FAM57AQ8TBR7 257 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 NDUFA4L2Q9NRX3 87 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 LAMTOR2Q9Y2Q5 125 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 IGHV1-69-2A0A0G2JMI3 117 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 MOSP00540 346 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 REG1AP05451 166 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 KIAA1644Q3SXP7 199 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 C8orf31Q8N9H6 132 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 NEU1Q99519 415 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A2Q9BXI2 301 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 WNT10AQ9GZT5 417 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 OTORQ9NRC9 128 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 MRPS16Q9Y3D3 137 aaKnown RBP4.55□□□□□ -1.68
SCN3A-210ENST00000640652 DMRTA1Q5VZB9 504 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 NUP35Q8NFH5 326 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 EPDR1Q9UM22 224 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 CYYR1Q96J86 154 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 PKD1L2Q7Z442 2459 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 FAM231BA6NCW3 169 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 PLAUP00749 431 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 TDGF1P3P51864 188 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 C11orf53Q8IXP5 236 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 C8orf46Q8TAG6 207 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM133Q9H2Q1 129 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 APELAP0DMC3 54 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 COL25A1Q9BXS0 654 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-210ENST00000640652 GOLT1AQ6ZVE7 132 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 Q6ZWC4 215 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 LPAR2Q9HBW0 351 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 HIF1ANQ9NWT6 349 aa4.55□□□□□ -1.68
SCN3A-210ENST00000640652 FOXH1O75593 365 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 IGHV1-46P01743 117 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 COX7A1P24310 79 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TWIST1Q15672 202 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 CR1LQ2VPA4 569 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 LINC01559Q495D7 138 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 Q6ZR03 302 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 OR8A1Q8NGG7 326 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PMS2P5A8MQ11 134 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TSPOP30536 169 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 EIF4EBP1Q13541 118 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PDE6HQ13956 83 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 SAPCD1Q5SSQ6 148 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TEX36Q5VZQ5 186 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TCF24Q7RTU0 167 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 GAFA1Q96PS6 74 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PEF1Q9UBV8 284 aaKnown RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 CELSR3Q9NYQ7 3312 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ABCA2Q9BZC7 2435 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PGPA6NDG6 321 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 BMPR1BO00238 502 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 BMI1P35226 326 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 SPATA31B1PQ5VZV4 182 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PVRIGQ6DKI7 326 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 CDPF1Q6NVV7 123 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ODF3L1Q8IXM7 274 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ST6GALNAC3Q8NDV1 305 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 GUCD1Q96NT3 240 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 OR4C46A6NHA9 309 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 RNASE2P10153 161 aaKnown RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF134P52741 427 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 DAZAP2Q15038 168 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 IGFL3Q6UXB1 125 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PPP1R27Q86WC6 154 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ATOH7Q8N100 152 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TEX45Q8NA69 505 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 GOSR1O95249 250 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 CSN3P07498 182 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ESDP10768 282 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 CDKN1AP38936 164 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 GPR6P46095 362 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF137PP52743 207 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 A0A1W2PS18 150 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 GGTLC3B5MD39 225 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 HINT1P49773 126 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 COTL1Q14019 142 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TPTE2P1Q5T6R2 138 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 EYSQ5T1H1 3165 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TOMM40O96008 361 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms