RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 USF2Q15853 346 aaPredicted RBP9.98□□□□□ -0.81
GTF3A-209ENST00000640289 DEFB114Q30KQ6 69 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 CD300EQ496F6 205 aaPredicted RBP9.98□□□□□ -0.81
GTF3A-209ENST00000640289 OR51G1Q8NGK1 321 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 OR2T35Q8NGX2 323 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 ASB13Q8WXK3 278 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 MARC2Q969Z3 335 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 GINS3Q9BRX5 216 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 SMPXQ9UHP9 88 aa9.98□□□□□ -0.81
GTF3A-209ENST00000640289 hCG_2014768A0A024R1R8 64 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 WI2-2373I1.2A0A1W2PRP0 233 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 G3V3Q6 166 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 SMLR1H3BR10 107 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 LYZP61626 148 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 VWC2Q2TAL6 325 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 TEPPQ6URK8 271 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 CYP2G1PQ6ZSU1 146 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 RNF125Q96EQ8 232 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 TMEM147Q9BVK8 224 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 RHPN1-AS1Q9BWJ2 59 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
GTF3A-209ENST00000640289 HSPB11Q9Y547 144 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
GTF3A-209ENST00000640289 UBE2L5PA0A1B0GUS4 154 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 CHEK1O14757 476 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 FABP1P07148 127 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 NPPCP23582 126 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 BAXQ07812 192 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 FGL1Q08830 312 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 CLINT1Q14677 625 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 ATP6V1FQ16864 119 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 ST8SIA2Q92186 375 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 PRR25Q96S07 402 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 METTL26Q96S19 204 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 RNF2Q99496 336 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 MGST2Q99735 147 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 SMIM3Q9BZL3 60 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 AURKAIP1Q9NWT8 199 aaPredicted RBP9.96□□□□□ -0.82
GTF3A-209ENST00000640289 TECRQ9NZ01 308 aaKnown RBP9.96□□□□□ -0.82
GTF3A-209ENST00000640289 WDR83OSQ9Y284 106 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.82
GTF3A-209ENST00000640289 FXYD6-FXYD2A0A087WZ82 144 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 AGPAT2O15120 278 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 HNRNPCP07910 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
GTF3A-209ENST00000640289 CRYBB3P26998 211 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 DEFA6Q01524 100 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 TMEM61Q8N0U2 210 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 BPIFCQ8NFQ6 507 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 OR2K2Q8NGT1 345 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 VSIRQ9H7M9 311 aa9.95□□□□□ -0.82
GTF3A-209ENST00000640289 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
GTF3A-209ENST00000640289 A0A1B0GVG6 124 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 ZNF785A8K8V0 405 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 GP9P14770 177 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 FGF7P21781 194 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 STPG3Q8N7X2 389 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 DOK5Q9P104 306 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 RABAC1Q9UI14 185 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 SLC45A2Q9UMX9 530 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 U3KQE9 123 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 DNAH3Q8TD57 4116 aa9.94□□□□□ -0.82
GTF3A-209ENST00000640289 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 DFFBO76075 338 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 LINC00869P0C866 280 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 ORM2P19652 201 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 CAMLGP49069 296 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 EIF2B2P49770 351 aaKnown RBP9.93□□□□□ -0.82
GTF3A-209ENST00000640289 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
GTF3A-209ENST00000640289 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 AQP10Q96PS8 301 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 ATP5SQ99766 215 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
GTF3A-209ENST00000640289 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 RNF222A6NCQ9 220 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
GTF3A-209ENST00000640289 SELENOTP62341 195 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 MIC13Q5XKP0 118 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 ZNF546Q86UE3 836 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 NARS2Q96I59 477 aaKnown RBP9.92□□□□□ -0.82
GTF3A-209ENST00000640289 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
GTF3A-209ENST00000640289 FBXL17Q9UF56 701 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 TNFSF18Q9UNG2 199 aa9.92□□□□□ -0.82
GTF3A-209ENST00000640289 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 A0A1W2PS18 150 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 K7EIL1 84 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 BUB3O43684 328 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 BMI1P35226 326 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 NUP62P37198 522 aaPredicted RBP9.91□□□□□ -0.82
GTF3A-209ENST00000640289 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
GTF3A-209ENST00000640289 PLP1P60201 277 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 RAB31Q13636 194 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms