RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	EPDR1	Q9UM22	224 aa		11.52	□□□□□ -0.57
MED17-222	ENST00000640027	PLXNA3	P51805	1871 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027		A0A1B0GWB2	263 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	CCL20	P78556	96 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	FGFBP3	Q8TAT2	258 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	COL4A4	P53420	1690 aa	Predicted RBP	11.51	□□□□□ -0.57
MED17-222	ENST00000640027	RNASE7	Q9H1E1	156 aa	Known RBP	11.51	□□□□□ -0.57
MED17-222	ENST00000640027	TRGV11	A0A075B6L2	103 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	LINC00614	P0C842	121 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	CRIPAK	Q8N1N5	446 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	SSC4D	Q8WTU2	575 aa		11.51	□□□□□ -0.57
MED17-222	ENST00000640027	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.51	□□□□□ -0.57
MED17-222	ENST00000640027		A0A1W2PRE2	83 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	ERVK11-1	P61568	191 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	IGFBP3	P17936	291 aa	Predicted RBP	11.5	□□□□□ -0.57
MED17-222	ENST00000640027	CMC4	P56277	68 aa	Predicted RBP	11.5	□□□□□ -0.57
MED17-222	ENST00000640027	ST6GALNAC6	Q969X2	333 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	NPIPB5	A8MRT5	1133 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	C10orf126	Q8N4M7	172 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	PEF1	Q9UBV8	284 aa	Known RBP	11.5	□□□□□ -0.57
MED17-222	ENST00000640027	ZNF257	Q9Y2Q1	563 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	IGHV2-26	A0A0B4J1V2	119 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	OR10W1	Q8NGF6	305 aa		11.5	□□□□□ -0.57
MED17-222	ENST00000640027	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.49	□□□□□ -0.57
MED17-222	ENST00000640027	TYMS	P04818	313 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	ZNF329	Q86UD4	541 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	TMEM86B	Q8N661	226 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	DOCK4	Q8N1I0	1966 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	HIVEP3	Q5T1R4	2406 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	OVOL1	O14753	267 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	RIPPLY3	P57055	190 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	VMO1	Q7Z5L0	202 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	FBLN5	Q9UBX5	448 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	SFTA2	Q6UW10	78 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	RNF182	Q8N6D2	247 aa		11.49	□□□□□ -0.57
MED17-222	ENST00000640027	MED13	Q9UHV7	2174 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	NAPSA	O96009	420 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	PPBP	P02775	128 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	PLN	P26678	52 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.48	□□□□□ -0.57
MED17-222	ENST00000640027	IZUMO1R	A6ND01	250 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	LILRA1	O75019	489 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	CD28	P10747	220 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	KLRD1	Q13241	179 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	LYZL4	Q96KX0	146 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	WDR83OS	Q9Y284	106 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	SCN5A	Q14524	2016 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	ADARB2-AS1	A8MUL3	147 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	STAG3L3	P0CL85	134 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	TRAV12-3	A0A0B4J271	114 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	MLNR	O43193	412 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	IGHV1-8	P0DP01	117 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	ID3	Q02535	119 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MED17-222	ENST00000640027	SIGLEC15	Q6ZMC9	328 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	BEND2	Q8NDZ0	799 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	COQ2	Q96H96	371 aa		11.48	□□□□□ -0.57
MED17-222	ENST00000640027	OOSP1	A8MZH6	123 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	KLF17	Q5JT82	389 aa	Predicted RBP	11.47	□□□□□ -0.57
MED17-222	ENST00000640027	FLVCR1-AS1	Q8TAF5	88 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	PMS2P5	A8MQ11	134 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	EFNB1	P98172	346 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	PIP4P2	Q8N4L2	257 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	TMEM178B	H3BS89	294 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	LY6H	O94772	140 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	PRADC1	Q9BSG0	188 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	JPT2	Q9H910	190 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	RNF222	A6NCQ9	220 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	SRRM4	A7MD48	611 aa	Known RBP	11.47	□□□□□ -0.57
MED17-222	ENST00000640027	EFNA2	O43921	213 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	PSPN	O60542	156 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	C1QTNF9	P0C862	333 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	PRB4	P10163	310 aa	Predicted RBP	11.47	□□□□□ -0.57
MED17-222	ENST00000640027	CCL1	P22362	96 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	RPL23	P62829	140 aa	Known RBP	11.47	□□□□□ -0.57
MED17-222	ENST00000640027	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
MED17-222	ENST00000640027	EFNB3	Q15768	340 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	TMEM95	Q3KNT9	176 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	MINOS1	Q5TGZ0	78 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	FAM89B	Q8N5H3	189 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	MINOS1-NBL1	R4GNA1	71 aa		11.47	□□□□□ -0.57
MED17-222	ENST00000640027	CEP350	Q5VT06	3117 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	TMEM8B	A6NDV4	472 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	TEX38	Q6PEX7	206 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	GGN	Q86UU5	652 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	FAM169B	Q8N8A8	192 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	SLC25A15	Q9Y619	301 aa		11.46	□□□□□ -0.57
MED17-222	ENST00000640027	TRGV1	A0A0A0MS02	117 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	IGKV1-12	A0A0C4DH73	117 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	IGKV1D-12	P01611	117 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	CRYGS	P22914	178 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	RPL36A	P83881	106 aa	Known RBP	11.46	□□□□□ -0.58
MED17-222	ENST00000640027	ORMDL2	Q53FV1	153 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	LCNL1	Q6ZST4	164 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	KLHL30-AS1	Q8NEE0	82 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	RPL36AL	Q969Q0	106 aa	Known RBP	11.46	□□□□□ -0.58
MED17-222	ENST00000640027	SCN8A	Q9UQD0	1980 aa		11.46	□□□□□ -0.58
MED17-222	ENST00000640027	PSCA	O43653	123 aa		11.45	□□□□□ -0.58
MED17-222	ENST00000640027	RPL35A	P18077	110 aa	Known RBP	11.45	□□□□□ -0.58
MED17-222	ENST00000640027	RPL15	P61313	204 aa	Known RBP	11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms