RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 TRANK1O15050 2925 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 POLQO75417 2590 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 SLC17A3O00476 420 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 AREGP15514 252 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 CCKARP32238 428 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 GATA4P43694 442 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 BIVMQ86UB2 503 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 GPR82Q96P67 336 aa11.11□□□□□ -0.63
SCARB2-215ENST00000639145 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
SCARB2-215ENST00000639145 SPEGQ15772 3267 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 LOXP28300 417 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 EIF4E3Q8N5X7 224 aaKnown RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 LINC01587Q99440 93 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 MAP1LC3CQ9BXW4 147 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 RPL15P61313 204 aaKnown RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 C3orf36Q3SXR2 165 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 NMSQ5H8A3 153 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 TRAV5A0A0B4J249 113 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 PSG1P11464 419 aa11.1□□□□□ -0.63
SCARB2-215ENST00000639145 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-215ENST00000639145 MLANAQ16655 118 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 ZNF506Q5JVG8 444 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 MT-ND6P03923 174 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 SFRP2Q96HF1 295 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 CBY3A6NI87 242 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 SAP30O75446 220 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
SCARB2-215ENST00000639145 EFNB3Q15768 340 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 Q6ZRM9 215 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 MEOX2P50222 304 aa11.09□□□□□ -0.63
SCARB2-215ENST00000639145 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
SCARB2-215ENST00000639145 TRGC1P0CF51 173 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 LMO1P25800 156 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 NDPQ00604 133 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 PACRGQ96M98 296 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-215ENST00000639145 EML6Q6ZMW3 1958 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 MMP23AO75900 390 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 NRGNQ92686 78 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 LCNL1Q6ZST4 164 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 IL17RELQ6ZVW7 336 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 STHQ8IWL8 128 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 RNF5Q99942 180 aa11.08□□□□□ -0.64
SCARB2-215ENST00000639145 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
SCARB2-215ENST00000639145 VENTXO95231 258 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 SRIP30626 198 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 Q8TCH9 128 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 PMS2P5A8MQ11 134 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 UBE2E1P51965 193 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 TEX38Q6PEX7 206 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 UBE2L6O14933 153 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 DENND4AQ7Z401 1863 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 SCGB1C2P0DMR2 95 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 VAMP3Q15836 100 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 TMEM183BQ1AE95 376 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 RFNGQ9Y644 331 aa11.07□□□□□ -0.64
SCARB2-215ENST00000639145 LAMA1P25391 3075 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 IGHV1-69DA0A0B4J2H0 117 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 IGHV1-69P01742 117 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 CBLN1P23435 193 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 ERVK11-1P61568 191 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
SCARB2-215ENST00000639145 ASIPP42127 132 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 HERVK_113P61574 105 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-215ENST00000639145 CNTFRP26992 372 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 C19orf35Q6ZS72 473 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 C3orf56Q8N813 242 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 SCRT1Q9BWW7 348 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
SCARB2-215ENST00000639145 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
SCARB2-215ENST00000639145 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms