RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 C11orf1Q9H5F2 150 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 TUBA4BQ9H853 241 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 U3KQE9 123 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 RBMY1BA6NDE4 496 aaKnown RBP16.23■□□□□ 0.19
SCN1B-206ENST00000638536 RBMY1EA6NEQ0 496 aaKnown RBP16.23■□□□□ 0.19
SCN1B-206ENST00000638536 RBMY1DP0C7P1 496 aaKnown RBP16.23■□□□□ 0.19
SCN1B-206ENST00000638536 LINC00322Q6ZN03 302 aaPredicted RBP16.23■□□□□ 0.19
SCN1B-206ENST00000638536 THAP8Q8NA92 274 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 OR51G1Q8NGK1 321 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 SRD5A3Q9H8P0 318 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 GPN1Q9HCN4 374 aaPredicted RBP16.23■□□□□ 0.19
SCN1B-206ENST00000638536 DNAH7Q8WXX0 4024 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 ARL16Q0P5N6 197 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 OR2F1Q13607 317 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 ODF3L2Q3SX64 289 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 GSG1LQ6UXU4 331 aa16.23■□□□□ 0.19
SCN1B-206ENST00000638536 SNRPGP15A8MWD9 76 aa16.22■□□□□ 0.19
SCN1B-206ENST00000638536 TMEM182Q6ZP80 229 aaPredicted RBP16.22■□□□□ 0.19
SCN1B-206ENST00000638536 AGRNO00468 2067 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 PRAF2O60831 178 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 TSC22D2O75157 780 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 NHLRC4P0CG21 123 aaPredicted RBP16.21■□□□□ 0.19
SCN1B-206ENST00000638536 GATA2P23769 480 aaPredicted RBP16.21■□□□□ 0.19
SCN1B-206ENST00000638536 TAS2R30P59541 319 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 RRAS2P62070 204 aaPredicted RBP16.21■□□□□ 0.19
SCN1B-206ENST00000638536 RAB32Q13637 225 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 HAGHQ16775 308 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 TRGV9Q99603 122 aa16.21■□□□□ 0.19
SCN1B-206ENST00000638536 GOSR2O14653 212 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 P2RY1P47900 373 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 ZNF124Q15973 351 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 WFDC3Q8IUB2 231 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 STPG3Q8N7X2 389 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 RNF125Q96EQ8 232 aa16.2■□□□□ 0.18
SCN1B-206ENST00000638536 HNRNPCP07910 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCN1B-206ENST00000638536 FAM24BQ8N5W8 94 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 PBDC1Q9BVG4 233 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 MS4A6AQ9H2W1 248 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 OR4C46A6NHA9 309 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 S100A10P60903 97 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 RPL11P62913 178 aaKnown RBP16.19■□□□□ 0.18
SCN1B-206ENST00000638536 AKR1C1Q04828 323 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 TM2D3Q9BRN9 247 aa16.19■□□□□ 0.18
SCN1B-206ENST00000638536 A0A1W2PS18 150 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 SMCO3A2RU48 225 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 FAM24AA6NFZ4 105 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 C16orf54Q6UWD8 224 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 GLMPQ8WWB7 406 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 RABAC1Q9UI14 185 aa16.18■□□□□ 0.18
SCN1B-206ENST00000638536 L7N2F9 121 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 BUB3O43684 328 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 BMI1P35226 326 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 LYZP61626 148 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 VAMP2P63027 116 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 TMEM144Q7Z5S9 345 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 APRG1Q8IVJ8 170 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 U3KQK5 164 aa16.17■□□□□ 0.18
SCN1B-206ENST00000638536 H2BFSP57053 126 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 DLK1P80370 383 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 OR10P1Q8NGE3 313 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 TMEM231Q9H6L2 316 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 BCAP31P51572 246 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 CAV2P51636 162 aa16.16■□□□□ 0.18
SCN1B-206ENST00000638536 CST7O76096 145 aa16.15■□□□□ 0.18
SCN1B-206ENST00000638536 STXBP6Q8NFX7 210 aa16.15■□□□□ 0.18
SCN1B-206ENST00000638536 NARS2Q96I59 477 aaKnown RBP16.15■□□□□ 0.18
SCN1B-206ENST00000638536 MAP6D1Q9H9H5 199 aa16.15■□□□□ 0.18
SCN1B-206ENST00000638536 RETNQ9HD89 108 aa16.15■□□□□ 0.18
SCN1B-206ENST00000638536 DNASE2O00115 360 aaPredicted RBP16.14■□□□□ 0.17
SCN1B-206ENST00000638536 CD5P06127 495 aa16.14■□□□□ 0.17
SCN1B-206ENST00000638536 EIF2B2P49770 351 aaKnown RBP16.14■□□□□ 0.17
SCN1B-206ENST00000638536 RCHY1Q96PM5 261 aa16.14■□□□□ 0.17
SCN1B-206ENST00000638536 IGSF23A1L1A6 192 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 H0YIZ8 118 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 SSNA1O43805 119 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 PTTG1O95997 202 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 PAFAH1B2P68402 229 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 LRRC37A5PQ49AS3 106 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 DCANP1Q8TF63 244 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 NPVFQ9HCQ7 196 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 LYRM2Q9NU23 88 aaPredicted RBP16.13■□□□□ 0.17
SCN1B-206ENST00000638536 ALG5Q9Y673 324 aa16.13■□□□□ 0.17
SCN1B-206ENST00000638536 DEDDO75618 318 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 CYP2G1PQ6ZSU1 146 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 TMEM217Q8N7C4 229 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 GRAMD2BQ96HH9 432 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 FAM110AQ9BQ89 295 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 NMES1Q9C002 83 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 OR5AC2Q9NZP5 309 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 K7EQG2 157 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 FABP1P07148 127 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 SLC38A11Q08AI6 406 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 TMEM252Q8N6L7 170 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 ZMAT4Q9H898 229 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 MGAT4CQ9UBM8 478 aa16.12■□□□□ 0.17
SCN1B-206ENST00000638536 FNDC10F2Z333 226 aa16.11■□□□□ 0.17
SCN1B-206ENST00000638536 ORM2P19652 201 aa16.11■□□□□ 0.17
SCN1B-206ENST00000638536 PVALBP20472 110 aaPredicted RBP16.11■□□□□ 0.17
SCN1B-206ENST00000638536 LEMD1Q68G75 181 aa16.11■□□□□ 0.17
SCN1B-206ENST00000638536 LOC102724200A0A096LPH7 203 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms