RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CHRDL1Q9BU40 450 aa16.36■□□□□ 0.21
CLN8-213ENST00000637156 FN1P02751 2386 aaKnown RBP16.35■□□□□ 0.21
CLN8-213ENST00000637156 TRAV1-1A0A0B4J248 108 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 RNASE1P07998 156 aaKnown RBP16.35■□□□□ 0.21
CLN8-213ENST00000637156 RD3LP0DJH9 198 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 EEF1AKMT3Q96AZ1 226 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 DNAJC4Q9NNZ3 241 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 TRBV7-1A0A0A6YYK4 115 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 CTXND1A0A1B0GTU2 59 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 CDC34P49427 236 aaPredicted RBP16.35■□□□□ 0.21
CLN8-213ENST00000637156 FGF8P55075 233 aaPredicted RBP16.35■□□□□ 0.21
CLN8-213ENST00000637156 USMG5Q96IX5 58 aa16.35■□□□□ 0.21
CLN8-213ENST00000637156 A0A1W2PPV4 95 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 YPEL3P61236 119 aaPredicted RBP16.34■□□□□ 0.21
CLN8-213ENST00000637156 FAM78BQ5VT40 261 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 SPATA31B1PQ5VZV4 182 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 CLEC19AQ6UXS0 136 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 DOK5Q9P104 306 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 F8P00451 2351 aa16.34■□□□□ 0.21
CLN8-213ENST00000637156 ORM2P19652 201 aa16.33■□□□□ 0.21
CLN8-213ENST00000637156 GPR183P32249 361 aa16.33■□□□□ 0.21
CLN8-213ENST00000637156 PLP1P60201 277 aa16.33■□□□□ 0.21
CLN8-213ENST00000637156 KIAA0141Q14154 515 aaPredicted RBP16.33■□□□□ 0.21
CLN8-213ENST00000637156 GATAD1Q8WUU5 269 aa16.33■□□□□ 0.21
CLN8-213ENST00000637156 C19orf24Q9BVV8 132 aa16.33■□□□□ 0.21
CLN8-213ENST00000637156 MAP1LC3B2A6NCE7 125 aa16.33■□□□□ 0.2
CLN8-213ENST00000637156 TOMM40O96008 361 aa16.33■□□□□ 0.2
CLN8-213ENST00000637156 TEX38Q6PEX7 206 aa16.33■□□□□ 0.2
CLN8-213ENST00000637156 ZNF414Q96IQ9 312 aa16.33■□□□□ 0.2
CLN8-213ENST00000637156 MAP1LC3BQ9GZQ8 125 aa16.33■□□□□ 0.2
CLN8-213ENST00000637156 TMEM89A2RUT3 159 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 CRLF1O75462 422 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 RHOBP62745 196 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 IL34Q6ZMJ4 242 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 ZNF491Q8N8L2 437 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 OR51G1Q8NGK1 321 aa16.32■□□□□ 0.2
CLN8-213ENST00000637156 NUPL2O15504 423 aaKnown RBP16.31■□□□□ 0.2
CLN8-213ENST00000637156 OR5G3P0C626 314 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 SRSF3P84103 164 aaKnown RBP16.31■□□□□ 0.2
CLN8-213ENST00000637156 MORN5Q5VZ52 161 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 MIR17HGQ75NE6 70 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 OR1B1Q8NGR6 318 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 UHRF2Q96PU4 802 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 SCRT1Q9BWW7 348 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 ELOA3CA0A087WX78 387 aaPredicted RBP16.31■□□□□ 0.2
CLN8-213ENST00000637156 IGHV3-11P01762 117 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 HBE1P02100 147 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 FABP1P07148 127 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 STAG3L2P0CL84 134 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 STAG3L3P0CL85 134 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 RPL15P61313 204 aaKnown RBP16.31■□□□□ 0.2
CLN8-213ENST00000637156 SLC35B1P78383 322 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 TMPRSS5Q9H3S3 457 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 GAR1Q9NY12 217 aaKnown RBP16.31■□□□□ 0.2
CLN8-213ENST00000637156 FUT9Q9Y231 359 aa16.31■□□□□ 0.2
CLN8-213ENST00000637156 IGHV3-35A0A0C4DH35 117 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 A0A0G2JLM5 398 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 WI2-2373I1.2A0A1W2PRP0 233 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 COX7A2P2O60397 106 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 HYPMO75409 117 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 CRYBA1P05813 215 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 C10orf113Q5VZT2 155 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 Q8WTZ3 238 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 ATP6V0BQ99437 205 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 PFDN5Q99471 154 aa16.3■□□□□ 0.2
CLN8-213ENST00000637156 PPP5D1E7EU14 171 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 TGOLN2O43493 480 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 RPLP1P05386 114 aaKnown RBP16.29■□□□□ 0.2
CLN8-213ENST00000637156 LYZP61626 148 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 MRPL27Q9P0M9 148 aaKnown RBP16.29■□□□□ 0.2
CLN8-213ENST00000637156 NIPBLQ6KC79 2804 aaeCLIP16.29■□□□□ 0.2
CLN8-213ENST00000637156 TRAV5A0A0B4J249 113 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 SCO1O75880 301 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 OR2C1O95371 312 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 TRBV12-3P01733 135 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 IL4P05112 153 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 ELANEP08246 267 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 FOXE3Q13461 319 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 ZNF343Q6P1L6 599 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 LINC00305Q7Z4B0 112 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 COMMD1Q8N668 190 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 JMJD8Q96S16 334 aa16.29■□□□□ 0.2
CLN8-213ENST00000637156 TMA7Q9Y2S6 64 aaKnown RBP16.29■□□□□ 0.2
CLN8-213ENST00000637156 PUS1Q9Y606 427 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLN8-213ENST00000637156 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.28■□□□□ 0.2
CLN8-213ENST00000637156 KLHDC1Q8N7A1 406 aa16.28■□□□□ 0.2
CLN8-213ENST00000637156 RNF152Q8N8N0 203 aa16.28■□□□□ 0.2
CLN8-213ENST00000637156 OR4X2Q8NGF9 303 aa16.28■□□□□ 0.2
CLN8-213ENST00000637156 RNF125Q96EQ8 232 aa16.28■□□□□ 0.2
CLN8-213ENST00000637156 PBDC1Q9BVG4 233 aa16.28■□□□□ 0.2
CLN8-213ENST00000637156 RARRES2Q99969 163 aa16.27■□□□□ 0.2
CLN8-213ENST00000637156 SCGB2A1O75556 95 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 USF2Q15853 346 aaPredicted RBP16.27■□□□□ 0.19
CLN8-213ENST00000637156 MYOZ3Q8TDC0 251 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 ZNF503Q96F45 646 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 FAM167A-AS1Q96KT0 104 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 RNF2Q99496 336 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 GNB4Q9HAV0 340 aa16.27■□□□□ 0.19
CLN8-213ENST00000637156 TMEM218A2RU14 115 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms