RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 LY6HO94772 140 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 LBHQ53QV2 105 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 TEX43Q6ZNM6 134 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 FAM169BQ8N8A8 192 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
CACNA1A-228ENST00000636610 NCOR2Q9Y618 2525 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 HSBP1O75506 76 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 ERASQ7Z444 233 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 ZNF138P52744 262 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 Q0VG73 95 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 Q6ZS92 163 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 CHD8Q9HCK8 2581 aa11.28□□□□□ -0.6
CACNA1A-228ENST00000636610 THBDP07204 575 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 LRRC10Q5BKY1 277 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 WDR73Q6P4I2 378 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 Q6ZN92 141 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 NIT1Q86X76 327 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 PDPNQ86YL7 162 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 C18orf32Q8TCD1 76 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 BORCS7Q96B45 105 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 FXYD5Q96DB9 178 aa11.27□□□□□ -0.6
CACNA1A-228ENST00000636610 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 LYZP61626 148 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 Q8N976 141 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 PRSS33Q8NF86 280 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 CLEC7AQ9BXN2 247 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 TBR1Q16650 682 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
CACNA1A-228ENST00000636610 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 M0R2Z0 102 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 CSN3P07498 182 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 PLGLAQ15195 96 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 LY96Q9Y6Y9 160 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 PRRG2O14669 202 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 BPIFB3P59826 476 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 FAM57AQ8TBR7 257 aa11.26□□□□□ -0.61
CACNA1A-228ENST00000636610 RBP4P02753 201 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 GFRALQ6UXV0 394 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 CEACAM4O75871 244 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 CEACAM8P31997 349 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 LINC00173Q6ZV60 143 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 TRAV9-1A0A075B6T8 112 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 MUC21A0A140T8X8 626 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 MT-ND6P03923 174 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 VMA21Q3ZAQ7 101 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 RNF2Q99496 336 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 C20orf144Q9BQM9 153 aa11.25□□□□□ -0.61
CACNA1A-228ENST00000636610 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 TCTAP57738 103 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 EBLN2Q6P2I7 272 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 STPG4Q8N801 248 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 LINC01560Q8TB33 94 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 C17orf77Q96MU5 243 aa11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 MRPL32Q9BYC8 188 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-228ENST00000636610 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 HYPMO75409 117 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 CRYABP02511 175 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 ESDP10768 282 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 RNASE6Q93091 150 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 OR8B2Q96RD0 313 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms