RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ATP5G1P05496 136 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 FCER2P06734 321 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 S100A5P33763 92 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 ETV6P41212 452 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 ATP5G3P48201 142 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 SPINK9Q5DT21 86 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 H2BFWTQ7Z2G1 175 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 INS-IGF2F8WCM5 200 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 EREGO14944 169 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 RGS5O15539 181 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 BUB3O43684 328 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 SCGB2A1O75556 95 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 IFNA5P01569 189 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 PRM2P04554 102 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
CLN6-212ENST00000636020 TNFSF8P32971 234 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
CLN6-212ENST00000636020 TRAV30A0A087WSZ9 112 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 CBY3A6NI87 242 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 M0QYG6 137 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 ELK1P19419 428 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 FCN2Q15485 313 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 UBE2NLQ5JXB2 153 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 DHRS11Q6UWP2 260 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 SAMD12Q8N8I0 201 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 Q8WTZ3 238 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 FAT3Q8TDW7 4589 aa12.51□□□□□ -0.41
CLN6-212ENST00000636020 ZNF705GA8MUZ8 300 aaPredicted RBP12.5□□□□□ -0.41
CLN6-212ENST00000636020 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 APOA1P02647 267 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 OPRK1P41145 380 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 PAX9P55771 341 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 TMEM69Q5SWH9 247 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 FAM78BQ5VT40 261 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 S100ZQ8WXG8 99 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 WDR12Q9GZL7 423 aaKnown RBP12.5□□□□□ -0.41
CLN6-212ENST00000636020 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
CLN6-212ENST00000636020 V9GYH0 126 aa12.5□□□□□ -0.41
CLN6-212ENST00000636020 SUB1P53999 127 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLN6-212ENST00000636020 HAMPP81172 84 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 DHODHQ02127 395 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 ESRGQ1W209 222 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 RHBDL2Q9NX52 303 aa12.49□□□□□ -0.41
CLN6-212ENST00000636020 TRAV18A0A075B6X5 111 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 F6UB75 175 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 GPR31O00270 319 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 TSPOP30536 169 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 ID1P41134 155 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
CLN6-212ENST00000636020 OR1S2Q8NGQ3 325 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 DIRAS2Q96HU8 199 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 ZNF2Q9BSG1 426 aaPredicted RBP12.48□□□□□ -0.41
CLN6-212ENST00000636020 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 EXTL2Q9UBQ6 330 aa12.48□□□□□ -0.41
CLN6-212ENST00000636020 MRPS16Q9Y3D3 137 aaKnown RBP12.48□□□□□ -0.41
CLN6-212ENST00000636020 FAM25AB3EWG3 89 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 FAM25CB3EWG5 89 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 FAM25GB3EWG6 89 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 GSTZ1O43708 216 aaPredicted RBP12.47□□□□□ -0.41
CLN6-212ENST00000636020 PSMB3P49720 205 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 SPANXN2Q5MJ10 180 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 SLC35G3Q8N808 338 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
CLN6-212ENST00000636020 A0A0J9YX75 114 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 A8MTW9 85 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 SOCS3O14543 225 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 IL4P05112 153 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 RFX2P48378 723 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 RNASE12Q5GAN4 147 aaKnown RBP12.46□□□□□ -0.41
CLN6-212ENST00000636020 EBLN2Q6P2I7 272 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 AMTNQ6UX39 209 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 OR6F1Q8NGZ6 308 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 COQ8AQ8NI60 647 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.41
CLN6-212ENST00000636020 ABHD1Q96SE0 405 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 FXYD6Q9H0Q3 95 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 KLK11Q9UBX7 282 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 PLA2G2DQ9UNK4 145 aa12.46□□□□□ -0.41
CLN6-212ENST00000636020 FABP12A6NFH5 140 aa12.45□□□□□ -0.42
CLN6-212ENST00000636020 AZU1P20160 251 aa12.45□□□□□ -0.42
CLN6-212ENST00000636020 GCSHP23434 173 aa12.45□□□□□ -0.42
CLN6-212ENST00000636020 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
CLN6-212ENST00000636020 SDHCQ99643 169 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms