RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 FAM71F2Q6NXP2 309 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 DPM3Q9P2X0 92 aa9.68□□□□□ -0.86
COL11A1-211ENST00000635193 ICE1Q9Y2F5 2266 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 EFNA2O43921 213 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 IGKV1D-33P01593 117 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 IGKV1-33P01594 117 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 STPG1Q5TH74 334 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 Q0VG73 95 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 RNF144BQ7Z419 303 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
COL11A1-211ENST00000635193 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 MGST2Q99735 147 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 SNRPD3P62318 126 aaKnown RBP9.67□□□□□ -0.86
COL11A1-211ENST00000635193 PRR31Q5SQ13 230 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 SPATA31B1PQ5VZV4 182 aa9.67□□□□□ -0.86
COL11A1-211ENST00000635193 D6R8Y8 96 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 M0R2P5 195 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 IGKV1-5P01602 117 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 LY6EQ16553 131 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 CLEC2AQ6UVW9 174 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 TMEM14EPQ6UXP3 125 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.66□□□□□ -0.86
COL11A1-211ENST00000635193 FAM27E3Q08E93 113 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 ZIC4Q8N9L1 334 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
COL11A1-211ENST00000635193 IGLC2P0DOY2 106 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 CCL3L1P16619 93 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 ARPC1AQ92747 370 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 SMAD7O15105 426 aaKnown RBP9.66□□□□□ -0.86
COL11A1-211ENST00000635193 C10orf91Q5T1B1 145 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 ASCL4Q6XD76 172 aa9.66□□□□□ -0.86
COL11A1-211ENST00000635193 LOC102723996A0A087X1L8 192 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 TRGV3P03979 118 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 C1orf122Q6ZSJ8 110 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
COL11A1-211ENST00000635193 TOMM7Q9P0U1 55 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 APOBEC3AP31941 199 aaPredicted RBP9.65□□□□□ -0.86
COL11A1-211ENST00000635193 LAGE3Q14657 143 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 C2orf82Q6UX34 121 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 ATP6V0BQ99437 205 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 KLHDC3Q9BQ90 382 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 CHAC1Q9BUX1 264 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 PNRC2Q9NPJ4 139 aaKnown RBP9.65□□□□□ -0.86
COL11A1-211ENST00000635193 A0A1B0GUS0 222 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 PFN1P07737 140 aaKnown RBP9.65□□□□□ -0.86
COL11A1-211ENST00000635193 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
COL11A1-211ENST00000635193 SVILO95425 2214 aa9.65□□□□□ -0.86
COL11A1-211ENST00000635193 TMEM238C9JI98 176 aa9.65□□□□□ -0.87
COL11A1-211ENST00000635193 PVRIGQ6DKI7 326 aa9.65□□□□□ -0.87
COL11A1-211ENST00000635193 RNF125Q96EQ8 232 aa9.65□□□□□ -0.87
COL11A1-211ENST00000635193 SEPSECSQ9HD40 501 aaKnown RBP9.65□□□□□ -0.87
COL11A1-211ENST00000635193 FREM3P0C091 2139 aa9.65□□□□□ -0.87
COL11A1-211ENST00000635193 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 MESP1Q9BRJ9 268 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 COLQQ9Y215 455 aaPredicted RBP9.64□□□□□ -0.87
COL11A1-211ENST00000635193 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 K7EP13 123 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 CEP250Q9BV73 2442 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 C5orf63A6NC05 138 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 F2Z2F3 143 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 NCR2O95944 276 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 PAX1P15863 534 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 MCRIP2Q9BUT9 160 aaKnown RBP9.64□□□□□ -0.87
COL11A1-211ENST00000635193 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 TP53BP1Q12888 1972 aaPredicted RBP9.64□□□□□ -0.87
COL11A1-211ENST00000635193 MDC1Q14676 2089 aaKnown RBP9.64□□□□□ -0.87
COL11A1-211ENST00000635193 FOXH1O75593 365 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
COL11A1-211ENST00000635193 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 NCOR1O75376 2440 aa9.64□□□□□ -0.87
COL11A1-211ENST00000635193 EFEMP2O95967 443 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 C9orf118A6NHY6 69 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 LILRA1O75019 489 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 RNASE4P34096 147 aaKnown RBP9.63□□□□□ -0.87
COL11A1-211ENST00000635193 CLPSP04118 112 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 FXYD7P58549 80 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 FOXF2Q12947 444 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 LINC01549A6NIU2 74 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 ZC2HC1BQ5TFG8 222 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 C5orf24Q7Z6I8 188 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 CRIPAKQ8N1N5 446 aa9.63□□□□□ -0.87
COL11A1-211ENST00000635193 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
COL11A1-211ENST00000635193 C9orf106Q8NAJ2 232 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 C8orf46Q8TAG6 207 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 IGKV3D-20A0A0C4DH25 116 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 C17orf100A8MU93 164 aa9.62□□□□□ -0.87
COL11A1-211ENST00000635193 ANK1P16157 1881 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms