RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 FAM110DQ8TAY7 271 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-208ENST00000634934 Q8WTZ3 238 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 PYGO2Q9BRQ0 406 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 MANBALQ9NQG1 85 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 INS-IGF2F8WCM5 200 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 IFNA10P01566 189 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 PPIFP30405 207 aaKnown RBP11.3□□□□□ -0.6
LINC00339-208ENST00000634934 KIAA0141Q14154 515 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-208ENST00000634934 C10orf99Q6UWK7 81 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 LILRB2Q8N423 598 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 MS4A10Q96PG2 267 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 OR4C12Q96R67 309 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 H3BP45 60 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 CRYGCP07315 174 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 PF4V1P10720 104 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00339-208ENST00000634934 CFHR3Q02985 330 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 FOXL1Q12952 345 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 SLC24A4Q8NFF2 622 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
LINC00339-208ENST00000634934 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
LINC00339-208ENST00000634934 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 CLN5O75503 358 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 FABP1P07148 127 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
LINC00339-208ENST00000634934 RPS10P46783 165 aaKnown RBP11.28□□□□□ -0.6
LINC00339-208ENST00000634934 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 GSN-AS1Q9NRJ2 163 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 GNG13Q9P2W3 67 aa11.28□□□□□ -0.6
LINC00339-208ENST00000634934 ANK2Q01484 3957 aa11.27□□□□□ -0.6
LINC00339-208ENST00000634934 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 PHOX2AO14813 284 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 CYB5BO43169 146 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 MPDU1O75352 247 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 IGHG4P01861 327 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 NPY1RP25929 384 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 PROK1P58294 105 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.61
LINC00339-208ENST00000634934 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
LINC00339-208ENST00000634934 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 OR1P1Q8NH06 330 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
LINC00339-208ENST00000634934 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 TRGV3P03979 118 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 MFAP2P55001 183 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 RAB11AP62491 216 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 DOK5Q9P104 306 aa11.26□□□□□ -0.61
LINC00339-208ENST00000634934 A0A1B0GV50 99 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 H3BUA1 57 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 OR2J3O76001 311 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 ELANEP08246 267 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 CXCL1P09341 107 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H1BP16401 226 aaKnown RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 TPPP2P59282 170 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 RHOGP84095 191 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 FOXE3Q13461 319 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 C2orf83Q53S99 150 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 TMEM170AQ8WVE7 144 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 FANCD2OSQ96PS1 177 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 SLC39A9Q9NUM3 307 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
LINC00339-208ENST00000634934 FBXL7Q9UJT9 491 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BKO60814 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 PSMB8P28062 276 aa11.25□□□□□ -0.61
LINC00339-208ENST00000634934 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms