RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 FCN3O75636 299 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 LINC00614P0C842 121 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 ATXN8Q156A1 80 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 IL36BQ9NZH7 164 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 KLF12Q9Y4X4 402 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 NCKAP5O14513 1909 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 PTPRDP23468 1912 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 ERVH48-1M5A8F1 160 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 ZNF876PQ49A33 203 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 DKK4Q9UBT3 224 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 CCL1P22362 96 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 CBLN1P23435 193 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 TEX43Q6ZNM6 134 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 ZNF329Q86UD4 541 aa5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.55
SRGAP1-207ENST00000631006 LGALS1P09382 135 aaKnown RBP5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 TMEM256Q8N2U0 113 aa5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 MAPK1IP1LQ8NDC0 245 aa5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 COQ2Q96H96 371 aa5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 MSRB2Q9Y3D2 182 aa5.34□□□□□ -1.56
SRGAP1-207ENST00000631006 IGLV3-21P80748 117 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 CFHR3Q02985 330 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 C9orf62Q8N4C0 152 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 SNHG12Q9BXW3 62 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 C5orf66Q9H5L9 145 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 IZUMO1RA6ND01 250 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 M0R1W7 72 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 GATA3P23771 443 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 ZNF525Q8N782 197 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 MRPS18AQ9NVS2 196 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 SHANK1Q9Y566 2161 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 TRBV5-7A0A0A0MS05 114 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 A0A0G2JNJ9 132 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 F2Z2F3 143 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 DPM2O94777 84 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 RPL15P61313 204 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 APCDD1LQ8NCL9 501 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 Q9UFV3 132 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 RIF1Q5UIP0 2472 aaKnown RBP5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 LEPROTO15243 131 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 PRSS23O95084 383 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 SMIM10L1P0DMW3 83 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 RND3P61587 244 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 NDPQ00604 133 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 ZNF562Q6V9R5 426 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 SMIM10Q96HG1 83 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 PSG8Q9UQ74 426 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 SLC17A3O00476 420 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 MORN2Q502X0 79 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 TMEM144Q7Z5S9 345 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 ORAOV1Q8WV07 137 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 C1orf159Q96HA4 380 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 ROS1P08922 2347 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 OOSP1A8MZH6 123 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 MLNRO43193 412 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 TNFRSF6BO95407 300 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 LRRK1Q38SD2 2015 aa5.33□□□□□ -1.56
SRGAP1-207ENST00000631006 DPRXA6NFQ7 191 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 NPIPB13A6NJU9 1138 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SRRM4A7MD48 611 aaKnown RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 HIGD1CA8MV81 97 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 ITGB1BP1O14713 200 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 PKIGQ9Y2B9 76 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 PLXND1Q9Y4D7 1925 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 MBD3L5A6NJ08 208 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 TFF1P04155 84 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 MSMBP08118 114 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 FOXF2Q12947 444 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 ZNF114Q8NC26 417 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 MBD3L2Q8NHZ7 208 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 H3BMM0 161 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SEC11AP67812 179 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 UBE2WQ96B02 151 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 C4orf51C9J302 202 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SYNJ2BPP57105 145 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 ZNF48Q96MX3 618 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 OVOL2Q9BRP0 275 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 TNCP24821 2201 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 COL11A2P13942 1736 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 PQLC2LA1A4F0 135 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 UBE2BP63146 152 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 TMEM200BQ69YZ2 307 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SFTA2Q6UW10 78 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 RBM38Q9H0Z9 239 aaKnown RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SPCS1Q9Y6A9 102 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 GREB1LQ9C091 1923 aaPredicted RBP5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 IGHV1-3A0A0C4DH29 117 aa5.32□□□□□ -1.56
SRGAP1-207ENST00000631006 SIGLEC5O15389 551 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms