RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 NFYBP25208 207 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 IL3RAP26951 378 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF83P51522 516 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 EBLN2Q6P2I7 272 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 REG3GQ6UW15 175 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 TRAPPC6BQ86SZ2 158 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 TEX29Q8N6K0 151 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 CCL28Q9NRJ3 127 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF586Q9NXT0 402 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 CCDC167Q9P0B6 97 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 PTPRSQ13332 1948 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 MYH9P35579 1960 aaKnown RBP3.64□□□□□ -1.83
SDCBP-213ENST00000630925 TRAV27A0A087WT01 109 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 IGKV1D-43A0A0B4J1Z2 117 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 C9JQL5 133 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 K7ESM1 405 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 M0R1X1 148 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 COX7A2LO14548 114 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF253O75346 499 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 IGLV3-27P01718 113 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 SDC2P34741 201 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 INPP1P49441 399 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 AQP4P55087 323 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF846Q147U1 533 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 Q6ZRP5 223 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 SSX8Q7RTT4 187 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 NR2C2APQ86WQ0 139 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 OR4K13Q8NH42 304 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 LYZL4Q96KX0 146 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 C2orf50Q96LR7 162 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 CIB3Q96Q77 187 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-213ENST00000630925 SPIN2AQ99865 258 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 SPIN2BQ9BPZ2 258 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 GINS4Q9BRT9 223 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 C16orf95Q9H693 158 aa3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF71Q9NQZ8 489 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-213ENST00000630925 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TRBV20OR9-2A0A075B6H5 130 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 COLCA2A8K830 154 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 M0R378 163 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF73O43830 326 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-213ENST00000630925 IGLV2-8P01709 118 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 OR5AC1P0C628 307 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 RPL22P35268 128 aaKnown RBP3.63□□□□□ -1.83
SDCBP-213ENST00000630925 RPL23P62829 140 aaKnown RBP3.63□□□□□ -1.83
SDCBP-213ENST00000630925 AMTNQ6UX39 209 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF584Q8IVC4 421 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TMEM61Q8N0U2 210 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 LINC00311Q8N616 119 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF709Q8N972 641 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 PRSS3P2Q8NHM4 247 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TMEM158Q8WZ71 300 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TOMM6Q96B49 74 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 AK3Q9UIJ7 227 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 NLRC5Q86WI3 1866 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 LOXHD1Q8IVV2 1947 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 MYO9AB2RTY4 2548 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 DMXL2Q8TDJ6 3036 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TRAV9-1A0A075B6T8 112 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TAX1BP3O14907 124 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 SLC37A4O43826 429 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 KLF7O75840 302 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-213ENST00000630925 PLA2G2AP14555 144 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 NMUP48645 174 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 ZNF80P51504 273 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-213ENST00000630925 RRN3P1Q2M238 152 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 STPG1Q5TH74 334 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 Q6AWC8 147 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 TMUB2Q71RG4 321 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 STPG4Q8N801 248 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 LINC01555Q8NAE3 123 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 OR5C1Q8NGR4 320 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 SLC25A46Q96AG3 418 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 MS4A6EQ96DS6 147 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 ABHD14BQ96IU4 210 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 FKBP11Q9NYL4 201 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 RELNP78509 3460 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 CROCCQ5TZA2 2017 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 SCN2AQ99250 2005 aa3.63□□□□□ -1.83
SDCBP-213ENST00000630925 DSPPQ9NZW4 1301 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 FBN2P35556 2912 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 COL11A1P12107 1806 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-213ENST00000630925 SIP14410 1827 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 LAMA5O15230 3695 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 ODAMA1E959 279 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 IGHV3-48P01763 117 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 LINC00869P0C866 280 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 IFITM1P13164 125 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 TMEM258P61165 79 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 GNGT1P63211 74 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 CRADDP78560 199 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 QRFPP83859 136 aa3.62□□□□□ -1.83
SDCBP-213ENST00000630925 MRPL2Q5T653 305 aaKnown RBP3.62□□□□□ -1.83
SDCBP-213ENST00000630925 C22orf39Q6P5X5 142 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms