RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 OR51G1Q8NGK1 321 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 COQ8AQ8NI60 647 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 PFDN2Q9UHV9 154 aa11.07□□□□□ -0.64
PDLIM3-213ENST00000629667 CEBPZOSA8MTT3 80 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 PSG1P11464 419 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 RRN3P1Q2M238 152 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 AARDQ4LEZ3 155 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 RNASE12Q5GAN4 147 aaKnown RBP11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 GSG1LQ6UXU4 331 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 PBDC1Q9BVG4 233 aa11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
PDLIM3-213ENST00000629667 NXPH3O95157 252 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 PSMB3P49720 205 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 RORCP51449 518 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 PSG9Q00887 426 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 NOXA1Q86UR1 476 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 MAGT1Q9H0U3 335 aa11.05□□□□□ -0.64
PDLIM3-213ENST00000629667 CDS2O95674 445 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 CD3DP04234 171 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 ELK1P19419 428 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 ZNF79Q15937 498 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 OR13C8Q8NGS7 320 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 CACNG5Q9UF02 275 aa11.04□□□□□ -0.64
PDLIM3-213ENST00000629667 NBDYA0A0U1RRE5 68 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 HPGDSO60760 199 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 OR5AC1P0C628 307 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 TBPP20226 339 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 FAM78BQ5VT40 261 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 OR8G2PQ6IF36 304 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 Q8N1X5 172 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 RBPMSQ93062 196 aaKnown RBP11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
PDLIM3-213ENST00000629667 F6UB75 175 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 TNFAIP8O95379 198 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 PAX9P55771 341 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 KLF9Q13886 244 aaPredicted RBP11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 LHFPL5Q8TAF8 219 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 MARCH1Q8TCQ1 289 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 GLYATL2Q8WU03 294 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 GPR146Q96CH1 333 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 YIPF6Q96EC8 236 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 ABHD1Q96SE0 405 aa11.02□□□□□ -0.65
PDLIM3-213ENST00000629667 TEX13DA0A0J9YY54 714 aaPredicted RBP11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 ZFP92A6NM28 416 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 ISLRO14498 428 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 SOCS3O14543 225 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 SUPT4H1P63272 117 aaKnown RBP11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 OR4D10Q8NGI6 311 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 OR52I2Q8NH67 350 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 ZNRF2Q8NHG8 242 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 PPP1R14BQ96C90 147 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
PDLIM3-213ENST00000629667 A0A0J9YX75 114 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 NUDT3O95989 172 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 MEF2DQ14814 521 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 NMSQ5H8A3 153 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 TMEM268Q5VZI3 342 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 IGF2BP2-AS1Q96M15 143 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 NAA60Q9H7X0 242 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 RPRMQ9NS64 109 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 MTFP1Q9UDX5 166 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
PDLIM3-213ENST00000629667 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
PDLIM3-213ENST00000629667 LYRM9A8MSI8 78 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 ATP6V1G2O95670 118 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 RAB3DO95716 219 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 CCL18P55774 89 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 TAS2R19P59542 299 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 LYZP61626 148 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 NCS1P62166 190 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 ZNF90Q03938 601 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 SAMD13Q5VXD3 122 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 C16orf92Q96LL3 132 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 VCX3AQ9NNX9 186 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 DOK5Q9P104 306 aa10.99□□□□□ -0.65
PDLIM3-213ENST00000629667 U3KQ87 197 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms