RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 RPP30P78346 268 aaKnown RBP10.9□□□□□ -0.66
LINC00643-206ENST00000623985 GAMTQ14353 236 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 GGNBP1Q5YKI7 109 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 LEMD1Q68G75 181 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 LYG2Q86SG7 212 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 OR51G1Q8NGK1 321 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
LINC00643-206ENST00000623985 FABP1P07148 127 aa10.89□□□□□ -0.67
LINC00643-206ENST00000623985 OR4E1P0C645 316 aa10.89□□□□□ -0.67
LINC00643-206ENST00000623985 AP2S1P53680 142 aaPredicted RBP10.89□□□□□ -0.67
LINC00643-206ENST00000623985 DHRS2Q13268 280 aa10.89□□□□□ -0.67
LINC00643-206ENST00000623985 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
LINC00643-206ENST00000623985 COQ8AQ8NI60 647 aa10.89□□□□□ -0.67
LINC00643-206ENST00000623985 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
LINC00643-206ENST00000623985 IGKV1D-37A0A075B6S9 117 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 LINC00854A0A1B0GVQ3 168 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 BUB3O43684 328 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 ATF4P18848 351 aaPredicted RBP10.88□□□□□ -0.67
LINC00643-206ENST00000623985 CNPY1Q3B7I2 92 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 OR8G2PQ6IF36 304 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 STHQ8IWL8 128 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
LINC00643-206ENST00000623985 PRSS46E5RG02 174 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 WRBO00258 174 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 ADAP1O75689 374 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 CA1P00915 261 aaPredicted RBP10.87□□□□□ -0.67
LINC00643-206ENST00000623985 ZNF90Q03938 601 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 C4orf46Q504U0 113 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 TMEM217Q8N7C4 229 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 THAP8Q8NA92 274 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 TRGV9Q99603 122 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 NRN1Q9NPD7 142 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
LINC00643-206ENST00000623985 PAIP2BQ9ULR5 123 aaKnown RBP10.87□□□□□ -0.67
LINC00643-206ENST00000623985 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 JTBO76095 146 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 IFNA21P01568 189 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 ANXA7P20073 488 aaKnown RBP10.86□□□□□ -0.67
LINC00643-206ENST00000623985 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
LINC00643-206ENST00000623985 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 C20orf85Q9H1P6 137 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 SEPSECSQ9HD40 501 aaKnown RBP10.86□□□□□ -0.67
LINC00643-206ENST00000623985 HYDINQ4G0P3 5121 aa10.86□□□□□ -0.67
LINC00643-206ENST00000623985 DNAH1Q9P2D7 4330 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 H3BP45 60 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 LYRM1O43325 122 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 SPP1P10451 314 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 LYZP61626 148 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
LINC00643-206ENST00000623985 EWSR1Q01844 656 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00643-206ENST00000623985 ID3Q02535 119 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 TMEM41BQ5BJD5 291 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
LINC00643-206ENST00000623985 RARRES2Q99969 163 aa10.85□□□□□ -0.67
LINC00643-206ENST00000623985 C11orf68Q9H3H3 251 aaKnown RBP10.85□□□□□ -0.67
LINC00643-206ENST00000623985 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
LINC00643-206ENST00000623985 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
LINC00643-206ENST00000623985 NKX2-1P43699 371 aaPredicted RBP10.84□□□□□ -0.67
LINC00643-206ENST00000623985 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
LINC00643-206ENST00000623985 LINC00299Q6ZSB3 139 aa10.84□□□□□ -0.67
LINC00643-206ENST00000623985 CCDC32Q9BV29 185 aa10.84□□□□□ -0.67
LINC00643-206ENST00000623985 FBXL17Q9UF56 701 aa10.84□□□□□ -0.67
LINC00643-206ENST00000623985 CXorf65A6NEN9 183 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 SNRPGP15A8MWD9 76 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 PLA2G10O15496 165 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 SSSCA1O60232 199 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 CFDP00746 253 aaPredicted RBP10.83□□□□□ -0.68
LINC00643-206ENST00000623985 POLR2GP62487 172 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00643-206ENST00000623985 PMS2P11Q13670 270 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 C1orf194Q5T5A4 169 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 ACOT7LQ6ZUV0 252 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 OR11H2Q8NH07 326 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 MITD1Q8WV92 249 aa10.83□□□□□ -0.68
LINC00643-206ENST00000623985 C4BPBP20851 252 aa10.82□□□□□ -0.68
LINC00643-206ENST00000623985 AKR1C1Q04828 323 aa10.82□□□□□ -0.68
LINC00643-206ENST00000623985 OR2F1Q13607 317 aa10.82□□□□□ -0.68
LINC00643-206ENST00000623985 IAH1Q2TAA2 248 aaPredicted RBP10.82□□□□□ -0.68
LINC00643-206ENST00000623985 PSENENQ9NZ42 101 aa10.82□□□□□ -0.68
LINC00643-206ENST00000623985 SLC45A2Q9UMX9 530 aa10.82□□□□□ -0.68
LINC00643-206ENST00000623985 SCGB1D2O95969 90 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 TCRBP04435 133 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 BPIFCQ8NFQ6 507 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 PPP1R14BQ96C90 147 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 SMIM8Q96KF7 97 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 RAB40CQ96S21 281 aa10.81□□□□□ -0.68
LINC00643-206ENST00000623985 PMS2P5A8MQ11 134 aa10.8□□□□□ -0.68
LINC00643-206ENST00000623985 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-206ENST00000623985 S100A7P31151 101 aa10.8□□□□□ -0.68
LINC00643-206ENST00000623985 PSMB3P49720 205 aa10.8□□□□□ -0.68
LINC00643-206ENST00000623985 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
LINC00643-206ENST00000623985 ZBTB8BQ8NAP8 495 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-206ENST00000623985 NUDT15Q9NV35 164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms