RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 S4R3C0 116 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 RBBP6Q7Z6E9 1792 aaKnown RBP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 PYCARD-AS1I3L0S3 204 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 EWSR1Q01844 656 aaKnown RBP eCLIP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 SYNJ2BPP57105 145 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 LRP5O75197 1615 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 TTC28Q96AY4 2481 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 C8orf82Q6P1X6 216 aaPredicted RBP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 NAV3Q8IVL0 2385 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 A8MWV9 139 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 IGF2P01344 180 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 ELANEP08246 267 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 TMEM222Q9H0R3 208 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 MRPL36Q9P0J6 103 aaKnown RBP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 hADV29S1A0JD25 119 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 IGKV1D-12P01611 117 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 TCRAP04437 139 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 OTOGLQ3ZCN5 2332 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 IGHV1-69DA0A0B4J2H0 117 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 IGHV1-69P01742 117 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 ANGP03950 147 aaKnown RBP5.23□□□□□ -1.57
CDKL5-205ENST00000623535 GP9P14770 177 aa5.23□□□□□ -1.57
CDKL5-205ENST00000623535 LINC00303Q3SY05 128 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 IGF2BP2-AS1Q96M15 143 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 Q9HAA7 133 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 MYO18BQ8IUG5 2567 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 C1QBP02746 253 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 AZU1P20160 251 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 HILS1P60008 231 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 TIMM17AQ99595 171 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 KDM3BQ7LBC6 1761 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 LAMA4Q16363 1823 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 IFITM3Q01628 133 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 MIC13Q5XKP0 118 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 NPIPB13A6NJU9 1138 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 EGR2P11161 476 aaPredicted RBP5.22□□□□□ -1.57
CDKL5-205ENST00000623535 SLC25A47Q6Q0C1 308 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 NFE4Q86UQ8 179 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 VPREB3Q9UKI3 123 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 TRAV3A0A0B4J244 114 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 SOCS1O15524 211 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 CFHR2P36980 270 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 DEFB131AP59861 70 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 ZC2HC1AQ96GY0 325 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 BCL2P10415 239 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 UBE2E1P51965 193 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 EGR4Q05215 589 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 DSCR8Q96T75 97 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 DENND4AQ7Z401 1863 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 A0A0G2JNJ9 132 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 UMODP07911 640 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 TMEM243Q9BU79 118 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 Q9UFV3 132 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 FUT9Q9Y231 359 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 RHOHQ15669 191 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 ZNF876PQ49A33 203 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 IMMP1LQ96LU5 166 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 Q9H3A6 140 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 IGHG3P01860 377 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 RCC1P18754 421 aaPredicted RBP5.22□□□□□ -1.57
CDKL5-205ENST00000623535 SNRPEP62304 92 aaKnown RBP5.22□□□□□ -1.57
CDKL5-205ENST00000623535 PIFOQ8TCI5 191 aa5.22□□□□□ -1.57
CDKL5-205ENST00000623535 SIGLEC5O15389 551 aa5.21□□□□□ -1.57
CDKL5-205ENST00000623535 YPEL1O60688 119 aa5.21□□□□□ -1.57
CDKL5-205ENST00000623535 YPEL2Q96QA6 119 aa5.21□□□□□ -1.57
CDKL5-205ENST00000623535 FREM1Q5H8C1 2179 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TRPM3Q9HCF6 1732 aaPredicted RBP5.21□□□□□ -1.58
CDKL5-205ENST00000623535 A0A087WWC5 75 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 EPOPA6NHQ4 379 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 RFNGQ9Y644 331 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TRAV8-1A0A0A6YYK1 113 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 PRSS29PA6NIE9 313 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 IGLV3-19P01714 112 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 SAA4P35542 130 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 PSG3Q16557 428 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TMEM249Q2WGJ8 235 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 C5orf24Q7Z6I8 188 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 AQP3Q92482 292 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TCTEX1D4Q5JR98 221 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 SRSF8Q9BRL6 282 aaKnown RBP5.21□□□□□ -1.58
CDKL5-205ENST00000623535 NDUFAF3Q9BU61 184 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 ZIC3O60481 467 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 PGLYRP1O75594 196 aaPredicted RBP5.21□□□□□ -1.58
CDKL5-205ENST00000623535 PEX11BO96011 259 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 RPUSD1Q9UJJ7 312 aaKnown RBP5.21□□□□□ -1.58
CDKL5-205ENST00000623535 CCL24O00175 119 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 FUSP35637 526 aaKnown RBP eCLIP5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TMEM258P61165 79 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 PLSCR4Q9NRQ2 329 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 TRAV25A0A0B4J276 109 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 A0A1W2PR77 199 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 H3BQ85 93 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 HLA-DQB1P01920 261 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 NABP1Q96AH0 204 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 SPATA25Q9BR10 227 aa5.21□□□□□ -1.58
CDKL5-205ENST00000623535 NDUFB4O95168 129 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms