RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y GSTZ1O43708 216 aaPredicted RBP11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SNRPD3P62318 126 aaKnown RBP11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y TMEM268Q5VZI3 342 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y C16orf54Q6UWD8 224 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y OR51S1Q8NGJ8 323 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y GPR146Q96CH1 333 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SCGB3A2Q96PL1 93 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y CACFD1Q9UGQ2 172 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y RSL24D1Q9UHA3 163 aaKnown RBP11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SCP2D1Q9UJQ7 156 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y CEBPZOSA8MTT3 80 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y C2orf83Q53S99 150 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y RNASEH2CQ8TDP1 164 aaKnown RBP11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y U3KQE9 123 aa11.61□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SPART-AS1P0CW21 52 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SLC25A4P12235 298 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y RND2P52198 227 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y OR1S2Q8NGQ3 325 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y H3BMM0 161 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y H3BMQ9 156 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y IGKV3-20P01619 116 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y IL4P05112 153 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SULT1A3P0DMM9 295 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y SULT1A4P0DMN0 295 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y OR10J1P30954 320 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y FXYD7P58549 80 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y ETFRF1Q6IPR1 90 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y PRSS54Q6PEW0 395 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y MCUBQ9NWR8 336 aa11.59□□□□□ -0.55
CD99-211ENST00000623253_PAR_Y FABP12A6NFH5 140 aa11.58□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y IGLC1P0CG04 106 aa11.58□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y HTN3P15516 51 aa11.58□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y PKHD1P08F94 4074 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ANXA3P12429 323 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y TNFSF8P32971 234 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y CCR6P51684 374 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y NMSQ5H8A3 153 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SOHLH1Q5JUK2 328 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ZNF575Q86XF7 245 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y MCFD2Q8NI22 146 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ABCA13Q86UQ4 5058 aa11.57□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y DYNC1H1Q14204 4646 aaKnown RBP11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y A0A0B4J2A0 478 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y PIGBOS1A0A0B4J2F0 54 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y TMEM189A5PLL7 270 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y NXPH3O95157 252 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y HLA-DRB4P13762 266 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y AKR1C4P17516 323 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y DEFB1P60022 68 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SRPXP78539 464 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SMCO1Q147U7 214 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ZNF705AQ6ZN79 300 aaPredicted RBP11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y LGI3Q8N145 548 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ACY3Q96HD9 319 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y LINC00052Q96N35 136 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SHPKQ9UHJ6 478 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y U3KQ87 197 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y HLA-DRB4X5D2U9 266 aa11.56□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y DNAH11Q96DT5 4516 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SMIM9A6NGZ8 99 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y BUB3O43684 328 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y RD3LP0DJH9 198 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SUPT4H1P63272 117 aaKnown RBP11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y NEU1Q99519 415 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y RFNGQ9Y644 331 aa11.55□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y NKX2-1P43699 371 aaPredicted RBP11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y AP3S2P59780 193 aa11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
CD99-211ENST00000623253_PAR_Y Q6ZR54 194 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms