RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 F2Z2F3 143 aa12.38□□□□□ -0.43
C9orf139-202ENST00000623196 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
C9orf139-202ENST00000623196 SPAG8Q99932 426 aaPredicted RBP12.38□□□□□ -0.43
C9orf139-202ENST00000623196 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
C9orf139-202ENST00000623196 C5orf63A6NC05 138 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 MYOD1P15172 320 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 C1orf194Q5T5A4 169 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 TREML4Q6UXN2 200 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 CLPSP04118 112 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 TRAV2A0A0B4J234 112 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 A0A1B0GW64 132 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 ERVK11-1P61568 191 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
C9orf139-202ENST00000623196 CFHR1Q03591 330 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
C9orf139-202ENST00000623196 SEPSECSQ9HD40 501 aaKnown RBP12.37□□□□□ -0.43
C9orf139-202ENST00000623196 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 NDUFS8O00217 210 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 SLC25A20O43772 301 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 CKS1BP61024 79 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 SUPT4H1P63272 117 aaKnown RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 FNDC1Q4ZHG4 1894 aaPredicted RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 IGLV3-32A0A0A0MS00 114 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 CCL19Q99731 98 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 COLQQ9Y215 455 aaPredicted RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 CHTOPQ9Y3Y2 248 aaKnown RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 FAM166AQ6J272 317 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
C9orf139-202ENST00000623196 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 LHX2P50458 406 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
C9orf139-202ENST00000623196 DLEU1O43261 78 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 C9orf106Q8NAJ2 232 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 THSD7BQ9C0I4 1608 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 GLMPQ8WWB7 406 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 IGKV1-12A0A0C4DH73 117 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 IGKV1D-12P01611 117 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 C7orf69Q9H7B7 122 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 A6NNC1 897 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 FAM57AQ8TBR7 257 aa12.35□□□□□ -0.43
C9orf139-202ENST00000623196 IGLV3-19P01714 112 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 RHOGP84095 191 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 SRSF7Q16629 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
C9orf139-202ENST00000623196 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
C9orf139-202ENST00000623196 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 NPIPB5A8MRT5 1133 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 EVI2AP22794 236 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 CD300EQ496F6 205 aaPredicted RBP12.34□□□□□ -0.43
C9orf139-202ENST00000623196 PYY3Q5JQD4 70 aa12.34□□□□□ -0.43
C9orf139-202ENST00000623196 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
C9orf139-202ENST00000623196 TMEM42Q69YG0 159 aa12.33□□□□□ -0.43
C9orf139-202ENST00000623196 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.43
C9orf139-202ENST00000623196 AGMATQ9BSE5 352 aa12.33□□□□□ -0.43
C9orf139-202ENST00000623196 ERG28Q9UKR5 140 aa12.33□□□□□ -0.43
C9orf139-202ENST00000623196 WISP1O95388 367 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 CRYGSP22914 178 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 GAGE2BQ13066 116 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 TMEM190Q8WZ59 177 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 RASL11AQ6T310 242 aa12.33□□□□□ -0.44
C9orf139-202ENST00000623196 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
C9orf139-202ENST00000623196 TRAV8-4A0A0B4J246 113 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 CD28P10747 220 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 FOXF2Q12947 444 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 FAM168AQ92567 244 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 ATXN8Q156A1 80 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 SHANK1Q9Y566 2161 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 TMEM256Q8N2U0 113 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 ZNF581Q9P0T4 197 aa12.32□□□□□ -0.44
C9orf139-202ENST00000623196 RPUSD1Q9UJJ7 312 aaKnown RBP12.32□□□□□ -0.44
C9orf139-202ENST00000623196 DOCK9Q9BZ29 2069 aa12.31□□□□□ -0.44
C9orf139-202ENST00000623196 BCL6BQ8N143 479 aaPredicted RBP12.31□□□□□ -0.44
C9orf139-202ENST00000623196 OR10W1Q8NGF6 305 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms