RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 CLEC3BP05452 202 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 CD7P09564 240 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 METTL15P1P0C7V9 234 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 IGLC1P0CG04 106 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 FOLR2P14207 255 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 HIST1H1BP16401 226 aaKnown RBP4.4□□□□□ -1.71
LINC00963-215ENST00000622972 FCGR2BP31994 310 aaPredicted RBP4.4□□□□□ -1.71
LINC00963-215ENST00000622972 HTR2BP41595 481 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 RND2P52198 227 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 GAMTQ14353 236 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 DEFB114Q30KQ6 69 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 TIGITQ495A1 244 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 ACOT7LQ6ZUV0 252 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 DEFB125Q8N687 156 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 IL17DQ8TAD2 202 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 SMIM8Q96KF7 97 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 ZNF436Q9C0F3 470 aaPredicted RBP4.4□□□□□ -1.71
LINC00963-215ENST00000622972 C21orf62Q9NYP8 219 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 TECRQ9NZ01 308 aaKnown RBP4.4□□□□□ -1.71
LINC00963-215ENST00000622972 RFNGQ9Y644 331 aa4.4□□□□□ -1.71
LINC00963-215ENST00000622972 AGRNO00468 2067 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 A8MWP6 167 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
LINC00963-215ENST00000622972 SSNA1O43805 119 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 DEDDO75618 318 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 MPC2O95563 127 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 CBLN1P23435 193 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 SNCAP37840 140 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 OPRK1P41145 380 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 S100A10P60903 97 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 RRAS2P62070 204 aaPredicted RBP4.39□□□□□ -1.71
LINC00963-215ENST00000622972 ERHP84090 104 aaKnown RBP4.39□□□□□ -1.71
LINC00963-215ENST00000622972 ZNF90Q03938 601 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 SPANXN5Q5MJ07 72 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 RBPMS2Q6ZRY4 209 aaKnown RBP4.39□□□□□ -1.71
LINC00963-215ENST00000622972 THAP8Q8NA92 274 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 UBAC2Q8NBM4 344 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 PPP1R1CQ8WVI7 109 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 TMEM190Q8WZ59 177 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 NPIPB3Q92617 1050 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 C20orf173Q96LM9 149 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 PDCD10Q9BUL8 212 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 NMES1Q9C002 83 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 WFDC10AQ9H1F0 79 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 EDA2RQ9HAV5 297 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 WFDC1Q9HC57 220 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 GPN1Q9HCN4 374 aaPredicted RBP4.39□□□□□ -1.71
LINC00963-215ENST00000622972 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 THYN1Q9P016 225 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 MLXQ9UH92 298 aa4.39□□□□□ -1.71
LINC00963-215ENST00000622972 NBEAL2Q6ZNJ1 2754 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TRBV7-1A0A0A6YYK4 115 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 LGALS9O00182 355 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TSC22D2O75157 780 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 CLN5O75503 358 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 CST7O76096 145 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 IFNA10P01566 189 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 IFNA21P01568 189 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 GATA2P23769 480 aaPredicted RBP4.38□□□□□ -1.71
LINC00963-215ENST00000622972 MFAP4P55083 255 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 NHLH2Q02577 135 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 USF2Q15853 346 aaPredicted RBP4.38□□□□□ -1.71
LINC00963-215ENST00000622972 Q56UQ5 140 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 OR8G2PQ6IF36 304 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 BTNL8Q6UX41 500 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TOMM20LQ6UXN7 152 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 GPHB5Q86YW7 130 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TMEM61Q8N0U2 210 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 TMEM252Q8N6L7 170 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 OR11H4Q8NGC9 324 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 OR4X1Q8NH49 305 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 RNASEH2CQ8TDP1 164 aaKnown RBP4.38□□□□□ -1.71
LINC00963-215ENST00000622972 ACY3Q96HD9 319 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 LYRM2Q9NU23 88 aaPredicted RBP4.38□□□□□ -1.71
LINC00963-215ENST00000622972 MBD2Q9UBB5 411 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 UFC1Q9Y3C8 167 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 U3KQ87 197 aa4.38□□□□□ -1.71
LINC00963-215ENST00000622972 LOC102724200A0A096LPH7 203 aaPredicted RBP4.37□□□□□ -1.71
LINC00963-215ENST00000622972 RNF222A6NCQ9 220 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 RBMY1BA6NDE4 496 aaKnown RBP4.37□□□□□ -1.71
LINC00963-215ENST00000622972 RBMY1EA6NEQ0 496 aaKnown RBP4.37□□□□□ -1.71
LINC00963-215ENST00000622972 MED6O75586 246 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 RBMY1DP0C7P1 496 aaKnown RBP4.37□□□□□ -1.71
LINC00963-215ENST00000622972 C8orf88P0DMB2 117 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 TAS2R30P59541 319 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 EWSR1Q01844 656 aaKnown RBP eCLIP4.37□□□□□ -1.711e-6■■■■□ 24.6
LINC00963-215ENST00000622972 VWC2Q2TAL6 325 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 OR1L6Q8NGR2 347 aa4.37□□□□□ -1.71
LINC00963-215ENST00000622972 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms