RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 V9GYV3 84 aa10.14□□□□□ -0.79
LITAF-221ENST00000622633 IGHG3P01860 377 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 FCGR2BP31994 310 aaPredicted RBP10.13□□□□□ -0.79
LITAF-221ENST00000622633 DUTP33316 252 aaKnown RBP10.13□□□□□ -0.79
LITAF-221ENST00000622633 SLC35B1P78383 322 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 FDCSPQ8NFU4 85 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 GGTLC1Q9BX51 225 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 GNG12Q9UBI6 72 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 IGHV3OR15-7A0A075B7D8 119 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 NPIPB5A8MRT5 1133 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 C18orf15Q96N68 181 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 KCNIP2Q9NS61 270 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
LITAF-221ENST00000622633 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 F8W1H4 67 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
LITAF-221ENST00000622633 TIGITQ495A1 244 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 RPL39P5Q59GN2 51 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 Q8TCH9 128 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 ARPC1AQ92747 370 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 TMEM191AQ9H0A3 160 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 IGKV1D-17A0A075B6S4 117 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 IGHV1-18A0A0C4DH31 117 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 RRHO14718 337 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 APCSP02743 223 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 PRTN3P24158 256 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 XGP55808 180 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 DUSP13Q9UII6 198 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 PCNX2A6NKB5 2137 aa10.12□□□□□ -0.79
LITAF-221ENST00000622633 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
LITAF-221ENST00000622633 ZNF134P52741 427 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 MSMPQ1L6U9 139 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 SPRNQ5BIV9 151 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 TIMM23BQ5SRD1 257 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
LITAF-221ENST00000622633 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 Q6ZUT4 128 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 SPACA3Q8IXA5 215 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 ABHD12Q8N2K0 398 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 HEYLQ9NQ87 328 aaPredicted RBP10.11□□□□□ -0.79
LITAF-221ENST00000622633 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 FAM90A27PA6NNH2 459 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 AMY1AP04745 511 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 UTF1Q5T230 341 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 C1orf162Q8NEQ5 155 aaPredicted RBP10.11□□□□□ -0.79
LITAF-221ENST00000622633 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
LITAF-221ENST00000622633 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
LITAF-221ENST00000622633 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 FGF6P10767 208 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 PDLIM3Q53GG5 364 aaPredicted RBP10.1□□□□□ -0.79
LITAF-221ENST00000622633 MBNL2Q5VZF2 373 aaKnown RBP10.1□□□□□ -0.79
LITAF-221ENST00000622633 FAM90A1Q86YD7 464 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 ZNRF1Q8ND25 227 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 LEAP2Q969E1 77 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
LITAF-221ENST00000622633 VCX2Q9H322 139 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 COL8A2P25067 703 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 KLF5Q13887 457 aaPredicted RBP10.1□□□□□ -0.79
LITAF-221ENST00000622633 MIC13Q5XKP0 118 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
LITAF-221ENST00000622633 hADV38S2A0JD32 116 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 C1orf229Q6ZS94 237 aaPredicted RBP10.09□□□□□ -0.79
LITAF-221ENST00000622633 MGST2Q99735 147 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 HEATR1Q9H583 2144 aaKnown RBP10.09□□□□□ -0.79
LITAF-221ENST00000622633 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
LITAF-221ENST00000622633 LOXL3P58215 753 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 ERVK-16P61578 105 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 KLRD1Q13241 179 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 FHL3Q13643 280 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 ANXA2RQ3ZCQ2 193 aa10.09□□□□□ -0.79
LITAF-221ENST00000622633 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
LITAF-221ENST00000622633 A0A1W2PRD5 423 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 A0A1W2PRF3 423 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 A0A1W2PRM7 423 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 FABP5P3A8MUU1 101 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 SRRM5B3KS81 715 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 GFRA3O60609 400 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 ARL14EPLP0DKL9 152 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 FAM201AQ5SY85 155 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 SSMEM1Q8WWF3 244 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 PTH2Q96A98 100 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 S1PR3Q99500 378 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 IFI27L2Q9H2X8 130 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 CSDC2Q9Y534 153 aaKnown RBP10.08□□□□□ -0.8
LITAF-221ENST00000622633 BDP1A6H8Y1 2624 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 PTPRBP23467 1997 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 MGST3O14880 152 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 OPRK1P41145 380 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 TCL1AP56279 114 aa10.08□□□□□ -0.8
LITAF-221ENST00000622633 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms