RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 Q6ZSV7 163 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 GATAD1Q8WUU5 269 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 MARC2Q969Z3 335 aa12.35□□□□□ -0.43
CBWD3-216ENST00000621396 ACTR3CQ9C0K3 210 aaPredicted RBP12.35□□□□□ -0.43
CBWD3-216ENST00000621396 ANKRD34BA5PLL1 514 aa12.34□□□□□ -0.43
CBWD3-216ENST00000621396 HAGHQ16775 308 aa12.34□□□□□ -0.43
CBWD3-216ENST00000621396 PSMB11A5LHX3 300 aa12.33□□□□□ -0.43
CBWD3-216ENST00000621396 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.43
CBWD3-216ENST00000621396 OR51G1Q8NGK1 321 aa12.33□□□□□ -0.43
CBWD3-216ENST00000621396 GNG13Q9P2W3 67 aa12.33□□□□□ -0.43
CBWD3-216ENST00000621396 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
CBWD3-216ENST00000621396 HSPB1P04792 205 aaKnown RBP12.33□□□□□ -0.44
CBWD3-216ENST00000621396 IL4P05112 153 aa12.33□□□□□ -0.44
CBWD3-216ENST00000621396 C11orf44Q8N8P7 122 aa12.33□□□□□ -0.44
CBWD3-216ENST00000621396 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
CBWD3-216ENST00000621396 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 C9JQL5 133 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 PSMB8P28062 276 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 TOR2AQ5JU69 321 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 LINC00305Q7Z4B0 112 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 TMEM86BQ8N661 226 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 ZNF418Q8TF45 676 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-216ENST00000621396 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
CBWD3-216ENST00000621396 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
CBWD3-216ENST00000621396 KCNIP2Q9NS61 270 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
CBWD3-216ENST00000621396 OR10J4P0C629 311 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 KIAA0141Q14154 515 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-216ENST00000621396 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 VN1R17PQ8TDU5 208 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 EEF1AKMT3Q96AZ1 226 aa12.32□□□□□ -0.44
CBWD3-216ENST00000621396 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
CBWD3-216ENST00000621396 IGHG4P01861 327 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 FOSL1P15407 271 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 HILS1P60008 231 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 SELENOTP62341 195 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 USF2Q15853 346 aaPredicted RBP12.31□□□□□ -0.44
CBWD3-216ENST00000621396 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 C2CD3Q4AC94 2353 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 SEC14L6B5MCN3 397 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 I3L521 148 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 ZNF414Q96IQ9 312 aa12.31□□□□□ -0.44
CBWD3-216ENST00000621396 UBE2G2P60604 165 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 RHOBP62745 196 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 KLK9Q2XQG4 91 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 KLK9Q9UKQ9 250 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 ZNF207O43670 478 aaKnown RBP12.3□□□□□ -0.44
CBWD3-216ENST00000621396 CRYBA1P05813 215 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 OR4X2Q8NGF9 303 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
CBWD3-216ENST00000621396 IGHV3OR16-13A0A075B7E8 117 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 IGHV3-74A0A0B4J1X5 117 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 HAX1O00165 279 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 OR7C2O60412 319 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 HYPMO75409 117 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 PYYP10082 97 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 GUK1Q16774 197 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 Q8N2B8 174 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 RNF125Q96EQ8 232 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 ZNF503Q96F45 646 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 FAM210AQ96ND0 272 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TRBV7-1A0A0A6YYK4 115 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TGOLN2O43493 480 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 OR2C1O95371 312 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TOMM40O96008 361 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
CBWD3-216ENST00000621396 SCGB2A2Q13296 93 aa12.29□□□□□ -0.44
CBWD3-216ENST00000621396 TRAV30A0A087WSZ9 112 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 H3BTX0 84 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 CEBPGP53567 150 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 IL34Q6ZMJ4 242 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 RXFP4Q8TDU9 374 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 Q8WTZ3 238 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 SLC25A2Q9BXI2 301 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 CLDN34H7C241 214 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-216ENST00000621396 ARL3P36405 182 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 OR5AU1Q8NGC0 362 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 LINC00052Q96N35 136 aa12.28□□□□□ -0.44
CBWD3-216ENST00000621396 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 HBE1P02100 147 aa12.27□□□□□ -0.44
CBWD3-216ENST00000621396 FCGR2BP31994 310 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms