RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 NRN1Q9NPD7 142 aa17.47■□□□□ 0.39
ATXN3-253ENST00000621269 PFDN2Q9UHV9 154 aa17.47■□□□□ 0.39
ATXN3-253ENST00000621269 DUXBA0A1W2PPF3 345 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 ZFP92A6NM28 416 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 MIFP14174 115 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 C4BPBP20851 252 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 GPX4P36969 197 aaPredicted RBP17.46■□□□□ 0.39
ATXN3-253ENST00000621269 NUP62P37198 522 aaPredicted RBP17.46■□□□□ 0.39
ATXN3-253ENST00000621269 TMEM128Q5BJH2 165 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 LGALS9CQ6DKI2 356 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 Q8NAQ8 132 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 RNF125Q96EQ8 232 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 SLC35E1Q96K37 410 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 PBDC1Q9BVG4 233 aa17.46■□□□□ 0.39
ATXN3-253ENST00000621269 FAM90A26D6RGX4 464 aa17.45■□□□□ 0.38
ATXN3-253ENST00000621269 SEPSECSQ9HD40 501 aaKnown RBP17.45■□□□□ 0.38
ATXN3-253ENST00000621269 IGHV4-28A0A0C4DH34 117 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 FABP1P07148 127 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 VAMP1P23763 118 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 NUTF2P61970 127 aaKnown RBP17.44■□□□□ 0.38
ATXN3-253ENST00000621269 GAMTQ14353 236 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 CENPSQ8N2Z9 138 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 TRIM63Q969Q1 353 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 HRH4Q9H3N8 390 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 CLEC5AQ9NY25 188 aa17.44■□□□□ 0.38
ATXN3-253ENST00000621269 CCDC160A6NGH7 325 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 ZNF705EA8MWA4 302 aaPredicted RBP17.43■□□□□ 0.38
ATXN3-253ENST00000621269 RBMY1A1P0DJD3 496 aaKnown RBP17.43■□□□□ 0.38
ATXN3-253ENST00000621269 RBMY1CP0DJD4 496 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 S100A5P33763 92 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 RAB11AP62491 216 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 RBMY1FQ15415 496 aaKnown RBP17.43■□□□□ 0.38
ATXN3-253ENST00000621269 OR8G2PQ6IF36 304 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 RPP25LQ8N5L8 163 aaKnown RBP17.43■□□□□ 0.38
ATXN3-253ENST00000621269 TBC1D24Q9ULP9 559 aa17.43■□□□□ 0.38
ATXN3-253ENST00000621269 C11orf94C9JXX5 98 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 TCTAP57738 103 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 ZNF90Q03938 601 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 SLC25A21Q9BQT8 299 aaPredicted RBP17.42■□□□□ 0.38
ATXN3-253ENST00000621269 C1QTNF4Q9BXJ3 329 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 PAIP2BQ9ULR5 123 aaKnown RBP17.42■□□□□ 0.38
ATXN3-253ENST00000621269 V9GYH0 126 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 X6R8D5 127 aa17.42■□□□□ 0.38
ATXN3-253ENST00000621269 PITX3O75364 302 aa17.41■□□□□ 0.38
ATXN3-253ENST00000621269 LRTM2Q8N967 370 aa17.41■□□□□ 0.38
ATXN3-253ENST00000621269 CSNK1G2-AS1Q8NCQ2 148 aa17.41■□□□□ 0.38
ATXN3-253ENST00000621269 DEDD2Q8WXF8 326 aa17.41■□□□□ 0.38
ATXN3-253ENST00000621269 SNRPGP15A8MWD9 76 aa17.4■□□□□ 0.38
ATXN3-253ENST00000621269 MED6O75586 246 aa17.4■□□□□ 0.38
ATXN3-253ENST00000621269 IAPPP10997 89 aa17.4■□□□□ 0.38
ATXN3-253ENST00000621269 SLC25A6P12236 298 aa17.4■□□□□ 0.38
ATXN3-253ENST00000621269 IGKV1D-37A0A075B6S9 117 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 IGLL5B9A064 214 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 H3BMM0 161 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 DEDDO75618 318 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 LYZP61626 148 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 RPP30P78346 268 aaKnown RBP17.39■□□□□ 0.37
ATXN3-253ENST00000621269 TMED3Q9Y3Q3 217 aa17.39■□□□□ 0.37
ATXN3-253ENST00000621269 SFT2D2O95562 160 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 HLA-DMBP28068 263 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 ID1P41134 155 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 NKX2-1P43699 371 aaPredicted RBP17.38■□□□□ 0.37
ATXN3-253ENST00000621269 ZNF79Q15937 498 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 PPP1R14BQ96C90 147 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 CIB3Q96Q77 187 aaPredicted RBP17.38■□□□□ 0.37
ATXN3-253ENST00000621269 XCL2Q9UBD3 114 aa17.38■□□□□ 0.37
ATXN3-253ENST00000621269 ELOA3CA0A087WX78 387 aaPredicted RBP17.37■□□□□ 0.37
ATXN3-253ENST00000621269 PPP1R1AQ13522 171 aa17.37■□□□□ 0.37
ATXN3-253ENST00000621269 OR2F1Q13607 317 aa17.37■□□□□ 0.37
ATXN3-253ENST00000621269 C1orf194Q5T5A4 169 aa17.37■□□□□ 0.37
ATXN3-253ENST00000621269 LINC00052Q96N35 136 aa17.37■□□□□ 0.37
ATXN3-253ENST00000621269 TRGV9Q99603 122 aa17.37■□□□□ 0.37
ATXN3-253ENST00000621269 HLA-DRB4P13762 266 aa17.36■□□□□ 0.37
ATXN3-253ENST00000621269 HLA-DRB4X5D2U9 266 aa17.36■□□□□ 0.37
ATXN3-253ENST00000621269 TRAV10A0A0B4J240 114 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 SYNGR2O43760 224 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 HOXB5P09067 269 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 Q6ZTC4 211 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 CCDC190Q86UF4 302 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 COQ8AQ8NI60 647 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 MAGT1Q9H0U3 335 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 AGRNO00468 2067 aa17.35■□□□□ 0.37
ATXN3-253ENST00000621269 WRBO00258 174 aa17.34■□□□□ 0.37
ATXN3-253ENST00000621269 PSMB3P49720 205 aa17.34■□□□□ 0.37
ATXN3-253ENST00000621269 SPANXN2Q5MJ10 180 aa17.34■□□□□ 0.37
ATXN3-253ENST00000621269 OR8I2Q8N0Y5 310 aa17.34■□□□□ 0.37
ATXN3-253ENST00000621269 WDR12Q9GZL7 423 aaKnown RBP17.34■□□□□ 0.37
ATXN3-253ENST00000621269 APLNQ9ULZ1 77 aa17.34■□□□□ 0.37
ATXN3-253ENST00000621269 CFDP00746 253 aaPredicted RBP17.33■□□□□ 0.36
ATXN3-253ENST00000621269 INPP1P49441 399 aa17.33■□□□□ 0.36
ATXN3-253ENST00000621269 GGNBP1Q5YKI7 109 aa17.33■□□□□ 0.36
ATXN3-253ENST00000621269 THAP8Q8NA92 274 aa17.33■□□□□ 0.36
ATXN3-253ENST00000621269 IGKV1OR2-108A0A075B7D4 117 aa17.32■□□□□ 0.36
ATXN3-253ENST00000621269 IGKV3-20P01619 116 aa17.32■□□□□ 0.36
ATXN3-253ENST00000621269 SPANXN5Q5MJ07 72 aa17.32■□□□□ 0.36
ATXN3-253ENST00000621269 GDF5OSQ5U4N7 250 aa17.32■□□□□ 0.36
ATXN3-253ENST00000621269 FOXI2Q6ZQN5 318 aa17.32■□□□□ 0.36
ATXN3-253ENST00000621269 SAV1Q9H4B6 383 aaPredicted RBP17.32■□□□□ 0.36
ATXN3-253ENST00000621269 UBE2MP61081 183 aaKnown RBP17.31■□□□□ 0.36
ATXN3-253ENST00000621269 DEFB1P60022 68 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms