RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PMS2P5A8MQ11 134 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 F2RL2O00254 374 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 CD24P25063 80 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 TANC2Q9HCD6 1990 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 NPIPB5A8MRT5 1133 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 M0QXV9 152 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 TMPRSS2O15393 492 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 ZNF883P0CG24 379 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 HIST1H1EP10412 219 aaKnown RBP8.75□□□□□ -1.01
CDH1-214ENST00000621016 NHLRC2Q8NBF2 726 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 FTH1P19P0C7X4 201 aa8.75□□□□□ -1.01
CDH1-214ENST00000621016 TRAV17A0A0B4J275 112 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 FAM90A27PA6NNH2 459 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 GPR183P32249 361 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 UBE2G1P62253 170 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 C20orf78Q9BR46 151 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 CALYQ9NYX4 217 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 TCF19Q9Y242 345 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 K7EP34 96 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 DLX1P56177 255 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 PSG3Q16557 428 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 UFSP1Q6NVU6 142 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 SGK494Q96LW2 274 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 MGST2Q99735 147 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 YAE1D1Q9NRH1 226 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 C15orf65H3BRN8 121 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 CGAP01215 116 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 IGKV1-16P04430 117 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 HES4Q9HCC6 221 aa8.74□□□□□ -1.01
CDH1-214ENST00000621016 SAA2-SAA4A0A096LPE2 208 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 PRR33A8MZF0 331 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 K7EM74 188 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 SAA2P0DJI9 122 aaPredicted RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 RPL31P62899 125 aaKnown RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 KIR3DS1Q14943 382 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 H1FXQ92522 213 aaKnown RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 F11RQ9Y624 299 aaKnown RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 DSCAMO60469 2012 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 KBTBD11-OT1A0A1B0GTJ5 212 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 HELTA6NFD8 242 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 PLAUP00749 431 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 PSG5Q15238 335 aa8.73□□□□□ -1.01
CDH1-214ENST00000621016 YTHDF2Q9Y5A9 579 aaKnown RBP8.73□□□□□ -1.01
CDH1-214ENST00000621016 TRBV20-1A0A075B6N2 111 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 IGHV3-21A0A0B4J1V1 117 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 FAM181BA6NEQ2 426 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 GFRA3O60609 400 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 MT-ATP8P03928 68 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 CRYGCP07315 174 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 SCGB1A1P11684 91 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 TIMP3P35625 211 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 RPL8P62917 257 aaKnown RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 PLA2G2CQ5R387 149 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 PPP1R35Q8TAP8 253 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 DKK4Q9UBT3 224 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 WDR83OSQ9Y284 106 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 TNRC6BQ9UPQ9 1833 aaKnown RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 MGST3O14880 152 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 ZNF474Q6S9Z5 364 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 MMD2Q8IY49 270 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 GGTLC1Q9BX51 225 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 MALRD1Q5VYJ5 2156 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 NCOR2Q9Y618 2525 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 CHD8Q9HCK8 2581 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 IGHV3-72A0A0B4J1Y9 119 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 H0YJW9 148 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 TNFAIP6P98066 277 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 TCF24Q7RTU0 167 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 CCL17Q92583 94 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 NDFIP1Q9BT67 221 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 COL25A1Q9BXS0 654 aaPredicted RBP8.72□□□□□ -1.01
CDH1-214ENST00000621016 IFI27L2Q9H2X8 130 aa8.72□□□□□ -1.01
CDH1-214ENST00000621016 P0C879 139 aa8.71□□□□□ -1.01
CDH1-214ENST00000621016 FOXA3P55318 350 aaPredicted RBP8.71□□□□□ -1.01
CDH1-214ENST00000621016 TMEM97Q5BJF2 176 aa8.71□□□□□ -1.01
CDH1-214ENST00000621016 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms