RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CD81P60033 236 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 ZNF90Q03938 601 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 FXYD3Q14802 87 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 OR2T10Q8NGZ9 312 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 WFDC12Q8WWY7 111 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 S4R3C0 116 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 CXorf1O96002 111 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 LINC00869P0C866 280 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 COL8A1P27658 744 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 ATP5IP56385 69 aaPredicted RBP7.93□□□□□ -1.14
VTA1-205ENST00000620996 MRGPRG-AS1Q2M3A8 158 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 TMEM37Q8WXS4 190 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 SIRPDQ9H106 197 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
VTA1-205ENST00000620996 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
VTA1-205ENST00000620996 OR10J4P0C629 311 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 ORM2P19652 201 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 SAA4P35542 130 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 CYP2G1PQ6ZSU1 146 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 KIR3DL3Q8N743 410 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 RNASEH2CQ8TDP1 164 aaKnown RBP7.93□□□□□ -1.14
VTA1-205ENST00000620996 TBX15Q96SF7 602 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 SLC45A2Q9UMX9 530 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 IGHV4-30-2A0A087WSY4 118 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 CRYGBP07316 175 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 BMI1P35226 326 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 BSXQ3C1V8 233 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 KLF17Q5JT82 389 aaPredicted RBP7.92□□□□□ -1.14
VTA1-205ENST00000620996 FAM90A2PQ658T7 463 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 RUSC1-AS1Q66K80 236 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 OR51G1Q8NGK1 321 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 OR4X1Q8NH49 305 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 CACNG8Q8WXS5 425 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 CFHR4Q92496 578 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 POLR3KQ9Y2Y1 108 aaPredicted RBP7.92□□□□□ -1.14
VTA1-205ENST00000620996 ABCA1O95477 2261 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 MAS1LP35410 378 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 FAM120AOSQ5T036 256 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 TOMM20LQ6UXN7 152 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 UHRF2Q96PU4 802 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 AURKAIP1Q9NWT8 199 aaPredicted RBP7.92□□□□□ -1.14
VTA1-205ENST00000620996 ZFP30Q9Y2G7 519 aa7.92□□□□□ -1.14
VTA1-205ENST00000620996 GGCTO75223 188 aaKnown RBP7.91□□□□□ -1.14
VTA1-205ENST00000620996 GCHFRP30047 84 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 MFAP2P55001 183 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 IQCJQ1A5X6 159 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 SP5Q6BEB4 398 aaPredicted RBP7.91□□□□□ -1.14
VTA1-205ENST00000620996 BRD3OSQ6XYD6 125 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 OR1B1Q8NGR6 318 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 WNT10AQ9GZT5 417 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 CLEC5AQ9NY25 188 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 TEX22C9J3V5 150 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 STAG3L2P0CL84 134 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PRR20EP86478 221 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PRR20CP86479 221 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PRR20DP86480 221 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PRR20BP86481 221 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PRR20AP86496 221 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 COL5A1-AS1Q5SY13 56 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 C1orf122Q6ZSJ8 110 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 TMEM183AQ8IXX5 376 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PARLQ9H300 379 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 TNFRSF19Q9NS68 423 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 PITPNC1Q9UKF7 332 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 TRAV5A0A0B4J249 113 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 TRAV40A0A0B4J280 105 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 A0A1B0GUS0 222 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 SH2D7A6NKC9 451 aaPredicted RBP7.91□□□□□ -1.14
VTA1-205ENST00000620996 RPL19P84098 196 aaKnown RBP7.91□□□□□ -1.14
VTA1-205ENST00000620996 C5orf64Q2M2E5 130 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 MINOS1Q5TGZ0 78 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 OR1P1Q8NH06 330 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 C10orf105Q8TEF2 133 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 F11RQ9Y624 299 aaKnown RBP7.91□□□□□ -1.14
VTA1-205ENST00000620996 MINOS1-NBL1R4GNA1 71 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 POLQO75417 2590 aa7.91□□□□□ -1.14
VTA1-205ENST00000620996 FNDC10F2Z333 226 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 FAM106CPP0CH98 169 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 UBE2E1P51965 193 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 UNQ5815/PRO19632Q6UWF5 114 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 RNF5Q99942 180 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 CSTL1Q9H114 145 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 TECRQ9NZ01 308 aaKnown RBP7.9□□□□□ -1.14
VTA1-205ENST00000620996 CSMD1Q96PZ7 3565 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 NPFFO15130 113 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 NDUFB4O95168 129 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 C10orf113Q5VZT2 155 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 MAPK1IP1LQ8NDC0 245 aa7.9□□□□□ -1.14
VTA1-205ENST00000620996 VPS13CQ709C8 3753 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 TCRBV4S1A1TA0A5B7 111 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 TAS2R45P59539 299 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 PAX2Q02962 417 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 TMEM241Q24JQ0 296 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 ARPC1AQ92747 370 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 ZNF355PQ9NSJ1 428 aa7.9□□□□□ -1.15
VTA1-205ENST00000620996 YTHDF2Q9Y5A9 579 aaKnown RBP7.9□□□□□ -1.15
VTA1-205ENST00000620996 INS-IGF2F8WCM5 200 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms